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SCNpilot_cont_300_bf_scaffold_4485_5

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(3611..4591)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix, Fis-type n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EXT7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.5
  • Coverage: 326.0
  • Bit_score: 642
  • Evalue 2.70e-181
Helix-turn-helix, Fis-type {ECO:0000313|EMBL:EYR79379.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 326.0
  • Bit_score: 642
  • Evalue 3.80e-181
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 77.6
  • Coverage: 326.0
  • Bit_score: 528
  • Evalue 1.20e-147

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 981
ATGAGATATCCCGCCGCCGAGAAGCTTGAGATCATCCGGCTCGTCGAGCAGTCGCATCTGCCCGCCAGGCAGACCCTCGACAAGCTGGGCATTCCACGGCCGACCTTCTACCGTTGGTATGACCGGTTCCTGACCCACGGCGTCGAAGGCCTGGAGGACCGGACGTCCGCACCGTCACGGGTCTGGAATCGCATTCCCGATGACATCCGGGACCGCATCATCACCATGGCGCTGGACCATGCCGATCTGTCGCCGCGCGAGCTGGCGGTGAAGTTCACCGACACGGAAAGCTATTTCGTGTCAGAGGCTTCGGTCTATCGCCTGCTCAAGACGCATGACCTGATCACGTCGCCAGCCTACATCGTCATCAAGGCCAGCGACGAATTCAAGGACAAGACCACCCGCCCGAACGAGATGTGGCAGACCGACTTCACCTATCTGAAGGTCATCGGCTGGGGCTGGTTCTATCTGTCTACCGTGCTCGACGACTTCTCACGCTACATCGTCGCTTGGAAGCTGTGCACGACCATGAAGGTGGACGACGTCACCGACACGCTCGACCTGGCCCTTGCCGCGTCGGGCTGCTACCGCGTCAAGGTCGAACACCGGCCCCGCCTTCTGTCCGACAACGGTCCGTCTTACGTCGCCTCCGATCTCGGCGAATGGCTGGAAAAATACAAGATCGAGCAGGTCCATGGCGCTCCCGGCCATCCGCAAACGCAGGGCAAGATCGAACGCTGGCACCAGACGCTGAAGAACCGCATCCTGCTCGAAAACTACTTCTTCCGGGAAGACCTCGAAGCCCAGATCGCGGCCTTCGTCGACCATTACAACCATCGCCGATACCACGAGAGCCTCGACAATCTCACCCCGGCTGACGTCTACTTCGGGCGCGGCCAGACCATCCTGCTCGAACGCGAAAGGATCAAACGAGACACCATCAGACAGCGTCGCTTGAACCACCACGCCAAAGCAGCTTAA
PROTEIN sequence
Length: 327
MRYPAAEKLEIIRLVEQSHLPARQTLDKLGIPRPTFYRWYDRFLTHGVEGLEDRTSAPSRVWNRIPDDIRDRIITMALDHADLSPRELAVKFTDTESYFVSEASVYRLLKTHDLITSPAYIVIKASDEFKDKTTRPNEMWQTDFTYLKVIGWGWFYLSTVLDDFSRYIVAWKLCTTMKVDDVTDTLDLALAASGCYRVKVEHRPRLLSDNGPSYVASDLGEWLEKYKIEQVHGAPGHPQTQGKIERWHQTLKNRILLENYFFREDLEAQIAAFVDHYNHRRYHESLDNLTPADVYFGRGQTILLERERIKRDTIRQRRLNHHAKAA*