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SCNpilot_cont_300_bf_scaffold_13213_7

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 5347..5781

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3JGH9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 57.5
  • Coverage: 106.0
  • Bit_score: 129
  • Evalue 2.00e-27
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:EMG51363.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochr UNIPROT
DB: UniProtKB
  • Identity: 57.5
  • Coverage: 106.0
  • Bit_score: 129
  • Evalue 2.80e-27
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 40.4
  • Coverage: 156.0
  • Bit_score: 112
  • Evalue 9.30e-23

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Taxonomy

Ochrobactrum sp. CDB2 → Ochrobactrum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 435
ATGGTCGACATAGTGACAAGCAGATCCGACGAAATCGAGAGGCTTTATCAGACCGAGCGCCGCCGGCTTGAGCGCATGGTCACGCGCAAGGTCGGCCCGTCGCAGGCGTCCGACGTGGTCCAGGAGGTCTTCGCGCGGATCTGGGAGAAGGCCAAGGAACATGTCGTGCTGACGCCCTCCTATCTGAGCCGCTGCGCAAGCAACTCGGCAATCGATCAGCTGCGCGTCGAGAAGCGTCACAAGGCCCTGGCCGAGAAGATCACCGCCGATCAATATGCCGCGCCAGTCGCAACGCCGCTCCAGATCGTCGAAGCCAAGGACCGCGTTCATGGTTGCACCTATCAGGAAATTGCTGCCACGATGGGCCTCAGCTACATCATGGTAGAGCGCGAGATAGCGAAAGCCCTGCTTGCCTGCCGGGAAAGCTTCAAATAA
PROTEIN sequence
Length: 145
MVDIVTSRSDEIERLYQTERRRLERMVTRKVGPSQASDVVQEVFARIWEKAKEHVVLTPSYLSRCASNSAIDQLRVEKRHKALAEKITADQYAAPVATPLQIVEAKDRVHGCTYQEIAATMGLSYIMVEREIAKALLACRESFK*