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SCNpilot_cont_300_bf_scaffold_1308_12

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_62_8

near complete RP 46 / 55 BSCG 46 / 51 MC: 2 ASCG 10 / 38
Location: comp(12662..13687)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Pa similarity UNIPROT
DB: UniProtKB
  • Identity: 59.1
  • Coverage: 320.0
  • Bit_score: 360
  • Evalue 2.30e-96
Pseudouridine synthase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWU2_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 59.1
  • Coverage: 320.0
  • Bit_score: 360
  • Evalue 1.70e-96
  • rbh
RluA family pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 320.0
  • Bit_score: 360
  • Evalue 4.70e-97

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1026
ATGAACGGCCCGAAAGACAGAACTGCAACCGTTGCGGCGGACGATGACGGCATCCGGCTGGACCGCTGGTTCCGCCGTCACCATCCCGCGCTGGGGCATGGCGCGTTGGAGAAGCTGCTGCGCACGGGCTGGGTCCGGTTGGACGGCAAACGCGCCAAGGCAGGTGATCGGGTCGCAGCGGGGCAGGTCATCCGCCTGCCGCCGCCAGGCCTGCTCGCAGAGGGGGAAAAGGCACAACACGAAACCGCCGCCCCGAAACCCGTCCGTCCTGCCATGGATGGCAGCCGGCTGAAGGACCTCATCTTGTATCGGGACGATGTGGTGATCGTGCTGAACAAGCCGTCCGGTCTTGCGACCCAGGGCGGTTCCGGCCTGACAGAGCATATCGACGGCATGCTCGACGCCCTGATGTTCGAGCGCAAACAGCGCCCCCGTCTGGTCCATCGGCTGGATCGCGATACCTCCGGCGTTCTCGTCATCGCGCGCACACCATCGGCGGCGGCGGCGTTGGCGGAATCGCTACGCCATCGCGATGCCTCGAAAATCTATTGGGCGCTGACCCGCGGCGTGCCGCAGAAGCTGCGCGGTACCATCCGCCTCGCCCTCGCGAAAGAGGGTGGGCACGGCCCGCATGGCCGCGACGAGCGCATGGTGGCAAAGGATGCGGGGGAGGATGCCAAACGCGCCGTCACCGATTATGCGGTGATCGATCGCGCCGCTGCGGATTTCGCCTGGGTGGCCGCCAGGCCGGTGACGGGCCGTACCCATCAGATCCGTGTCCATCTGGCGGAACTGGGCACACCGATTGTCGGCGATTTCAAATATGGTGGAACCGATGCGCGCCCACGCGGCGAGATCGAGGATCGGCTGCATCTGCATGCGCGTTCCATCGACATTGCGCATCCCTCCGGCGGCCGGCTCAGGGTGACGGCGCCGCTGCCGCCGCATATGATGCACACGTGGAGCTTGCTTGGCTTCGATCCCGATCTGCAAACCAACCCGTTTGGCGCCGCACGAACCCGATGA
PROTEIN sequence
Length: 342
MNGPKDRTATVAADDDGIRLDRWFRRHHPALGHGALEKLLRTGWVRLDGKRAKAGDRVAAGQVIRLPPPGLLAEGEKAQHETAAPKPVRPAMDGSRLKDLILYRDDVVIVLNKPSGLATQGGSGLTEHIDGMLDALMFERKQRPRLVHRLDRDTSGVLVIARTPSAAAALAESLRHRDASKIYWALTRGVPQKLRGTIRLALAKEGGHGPHGRDERMVAKDAGEDAKRAVTDYAVIDRAAADFAWVAARPVTGRTHQIRVHLAELGTPIVGDFKYGGTDARPRGEIEDRLHLHARSIDIAHPSGGRLRVTAPLPPHMMHTWSLLGFDPDLQTNPFGAARTR*