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SCNpilot_cont_300_bf_scaffold_1308_29

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_62_8

near complete RP 46 / 55 BSCG 46 / 51 MC: 2 ASCG 10 / 38
Location: comp(28800..29375)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S5 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=RS5_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 185.0
  • Bit_score: 294
  • Evalue 1.10e-76
30S ribosomal protein S5 similarity KEGG
DB: KEGG
  • Identity: 79.5
  • Coverage: 185.0
  • Bit_score: 294
  • Evalue 3.00e-77
30S ribosomal protein S5 {ECO:0000255|HAMAP-Rule:MF_01307}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamen similarity UNIPROT
DB: UniProtKB
  • Identity: 79.5
  • Coverage: 185.0
  • Bit_score: 294
  • Evalue 1.50e-76

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGGCGCGTGAAGAAGGCAGACGCCGGGACCGTGGGGATCGCGAAGAGCGTGACAACGAATTCGTCGACAAGCTGGTCCACATCAATCGCGTGGCGAAGGTGGTGAAGGGCGGCCGCCGTTTCGGCTTTGCGGCGCTCGTCGTCGTCGGCGATCAGCGTGGCCGGGTCGGTTTCGGCCATGGCAAGGCGCGTGAGGTGCCGGAAGCCATTCGCAAGGCGACCGATGCCGCCAAGCGCGCGCTGATCCGCGTGCCGCTGAAGGATGGGCGCACCCTGCATCATGAAACCCGCGGTCATCATGGCGCGGGCAAGGTTCTGGTCCGTCCGGCCCCGGCCGGTACCGGCATCATCGCCGGCGGCCCGATGCGCGCGGTGTTTGAATCGCTGGGCGTTGGCGATGTGGTCGCCAAATCGCTCGGCACCTCGAACCCGTATAATATGGTGCGTGCCACCTTCGATGCCCTGAAGTCGCAGCAAAGCCCGCGCATGATCGCGCAGCGCCGCGGCCGCAGCGTCAGCGAAATCATTTCCCGCCGCGAAGGCCAGAAGGGCGAACAGGCGCCAGCAGGAAGCTAA
PROTEIN sequence
Length: 192
MAREEGRRRDRGDREERDNEFVDKLVHINRVAKVVKGGRRFGFAALVVVGDQRGRVGFGHGKAREVPEAIRKATDAAKRALIRVPLKDGRTLHHETRGHHGAGKVLVRPAPAGTGIIAGGPMRAVFESLGVGDVVAKSLGTSNPYNMVRATFDALKSQQSPRMIAQRRGRSVSEIISRREGQKGEQAPAGS*