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SCNpilot_cont_300_bf_scaffold_1308_30

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_62_8

near complete RP 46 / 55 BSCG 46 / 51 MC: 2 ASCG 10 / 38
Location: comp(29407..29757)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L18 n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2LNQ3_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 113.0
  • Bit_score: 150
  • Evalue 8.90e-34
rplR; 50S ribosomal protein L18 similarity KEGG
DB: KEGG
  • Identity: 68.1
  • Coverage: 113.0
  • Bit_score: 150
  • Evalue 2.50e-34
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1353532 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalass similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 113.0
  • Bit_score: 150
  • Evalue 1.20e-33

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Taxonomy

Thalassospira permensis → Thalassospira → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 351
ATGACGACGAAGCTTTTCCAGCGGCGCAAGGGCCGCACGCGTTATCGCCTCGTCCAGAATGCGGCCGGGCGTCCGCGCCTGTCCGTCTATCGTTCGGGCAAGCATATCTATGCGCAGGTGATTGACGATCGCGCCGGTGAAACGCTCGCCGCCGCCTCGACGCATGAAAAAGATGCCGGCCTCGCCAAGACCTACAACGTCGATGCCGCCGGTGCCGTCGGCAGGAAGATCGCGGAACGTGCGCTGGCCAAGGGCGTGAAACAGGTTGTGTTCGACCGCGGCGGTTATATCTATCACGGGCGGGTCAAGGCGCTGGCCGATGCCGCGCGTGAAGGCGGTCTGGAGTTTTAA
PROTEIN sequence
Length: 117
MTTKLFQRRKGRTRYRLVQNAAGRPRLSVYRSGKHIYAQVIDDRAGETLAAASTHEKDAGLAKTYNVDAAGAVGRKIAERALAKGVKQVVFDRGGYIYHGRVKALADAAREGGLEF*