ggKbase home page

SCNpilot_cont_300_bf_scaffold_3895_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_62_8

near complete RP 46 / 55 BSCG 46 / 51 MC: 2 ASCG 10 / 38
Location: comp(219..1958)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPD9_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 74.7
  • Coverage: 565.0
  • Bit_score: 841
  • Evalue 5.40e-241
rpsA; 30S ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 74.7
  • Coverage: 565.0
  • Bit_score: 841
  • Evalue 1.50e-241
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamenti similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 565.0
  • Bit_score: 841
  • Evalue 7.60e-241

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1740
ATGGCAAGAGGCGCCACCGCAACCGTTACCCCGTCAATCGCAACCCCGTCCCGCGATGATTTCGCGGCCATGCTCGAAGCAAGCTTCGATGCCCAGTCGCCGCAGGAAGGCAATGTCATCAAGGGCACCATCGTTGCCATTGAAAACGACATGGCTGTGATCGATGTCGGCCTGAAGACCGAAGGCCGCGTGCCTCTCAAGGAATTCTCGATGCCGGGCCAGCCGGCCAATGTGAAGATCGGCGATGTGGTCGAGGTCTATCTGGAGCGTGTGGAAAACGCGCTTGGCGAGGCCGTCCTCAGCCGTGACAAGGCGCGGCGCGAGGAAAGCTGGATTCGCCTCGAAAAGGCGTTCAACGACAGCACCCGCGTGCATGGCGTGATCTTCGGCCGCGTCAAGGGCGGTTTCACCGTCGATCTCGACGGTGCGGTTGCCTTCCTTCCCGGCTCGCAGGTCGATGTGCGCCCGATGCGCGATGTCGGCCCGCTGATGAACCAGCAGCAGCTTTTCCAGATTCTGAAGATGGATCGCCGCCGCGGCAATATCGTGGTGTCGCGCCGTGCCGTGCTGGAAGAACGTCGTGCGGAAGAACGCACCTCGCTCGTCGCCAGCCTGCAGGAAAAGCAGGTGATCGAAGGCGTGGTGAAGAACATCACCGACTACGGCGCCTTCGTCGATCTGGGCGGTGTGGACGGTCTGTTGCACGTCACCGACATTGCCTGGCGCCGCGTCAGCCACCCGACCGAGGTGCTGAGCGTCGGCCAGACCGTGACGGTGCAGATCATCAAGATCAATCACGATACCCAGCGCATCAGCCTCGGCATGAAGCAGTTGCAGACCGATCCGTGGGAAGGCGTCGGCGCCAAATATCCGGTCGGCGCGCGCTTCAGCGGCAAGGTCACCAATGTCACCGATTACGGTGCTTTTGTGGAGTTGGAGCCGGGTGTCGAAGGTCTCGTCCATGTCTCCGAAATGAGCTGGGTGAAGAAGAACGTGGCCCCGTCGAAGATCGTCAATCCGGGTCAGGATGTGGATGTGCAGGTGCTGGAAGTCGATTCCAACAAGCGCCGCATCAGCCTCGGCCTGAAACAGTGCATGGACAATCCGTGGCAGGCCTTCGCGGTCAGCAATCCGCCGGGCAGCACGATCGAAGGCGAGATCAAGTCGATCACCGAATTCGGCCTCTTCGTCGGCCTCGACAACGATATCGACGGCATGGTGCATCTCTCCGATTTGTCGTGGGACAAGCCGGGCGAGCAGGCGGTTGCCGACTATCAGAAGGGTCAGGTGGTTCAGGCCAAGGTGCTCGACATCGATCCGGAAAAGGAACGCGTCAGCCTCGGAATCAAGCAGCTTGAAAGCGACCCGATGGACAAGGTCGGTCCGCTGCGCAAGGGCAATGTCGTCACCGTCACGGTCACCGAAGTGAACGATGGCGGCGTCGAAGTCAGCCTGACCGATGGCGTGAAGGCGTTCATCCGCCGTTCCGACCTCGCCCGCGACCGCGCCGATCAGCGCCCCGAACGTTTCGGCGTCGGCGACAAGATCGATGCGATGGTAACGAGCATCGACAAGGCCAGCCGCAGGATTTCGCTCTCCATCAAGGCGCGCGAAATATCGGAAGAGAAGGATGCCGTGGCGCAATACGGTTCCTCCGATTCCGGTGCTTCGCTGGGCGACATTCTGGGCGCTGCGCTGCGCAGGAAGTCCGGCAGCGACGGCGATGGAGACGACGAATAA
PROTEIN sequence
Length: 580
MARGATATVTPSIATPSRDDFAAMLEASFDAQSPQEGNVIKGTIVAIENDMAVIDVGLKTEGRVPLKEFSMPGQPANVKIGDVVEVYLERVENALGEAVLSRDKARREESWIRLEKAFNDSTRVHGVIFGRVKGGFTVDLDGAVAFLPGSQVDVRPMRDVGPLMNQQQLFQILKMDRRRGNIVVSRRAVLEERRAEERTSLVASLQEKQVIEGVVKNITDYGAFVDLGGVDGLLHVTDIAWRRVSHPTEVLSVGQTVTVQIIKINHDTQRISLGMKQLQTDPWEGVGAKYPVGARFSGKVTNVTDYGAFVELEPGVEGLVHVSEMSWVKKNVAPSKIVNPGQDVDVQVLEVDSNKRRISLGLKQCMDNPWQAFAVSNPPGSTIEGEIKSITEFGLFVGLDNDIDGMVHLSDLSWDKPGEQAVADYQKGQVVQAKVLDIDPEKERVSLGIKQLESDPMDKVGPLRKGNVVTVTVTEVNDGGVEVSLTDGVKAFIRRSDLARDRADQRPERFGVGDKIDAMVTSIDKASRRISLSIKAREISEEKDAVAQYGSSDSGASLGDILGAALRRKSGSDGDGDDE*