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SCNPILOT_CONT_300_BF_Brevundimonas_67_6

SCNPILOT_CONT_300_BF_Brevundimonas_diminuta_67_6
In projects: SCNPILOT_CONT_300_BF  |  SCN_92

Consensus taxonomy: Brevundimonas diminuta  →  Brevundimonas  →  Caulobacterales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Description

TS-ESOM, very fragmented but high identity to sequenced genome

Displaying items 1-50 of 418 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_cont_300_bf_scaffold_59087
Species: R_Alphaproteobacteria_66_14 (50%)
2 1006 bp 58.25 2.50 57.26
SCNpilot_cont_300_bf_scaffold_59101
Species: R_Brevundimonas_70_19 (100%)
1 1006 bp 61.73 4.49 87.67
SCNpilot_cont_300_bf_scaffold_58599
Species: Brevundimonas diminuta (100%)
1 1017 bp 68.04 3.70 93.22
SCNpilot_cont_300_bf_scaffold_58048
Species: Brevundimonas diminuta (100%)
3 1029 bp 67.06 6.83 87.17
SCNpilot_cont_300_bf_scaffold_57723
Species: Brevundimonas diminuta (100%)
1 1037 bp 67.50 5.81 94.60
SCNpilot_cont_300_bf_scaffold_57480
Species: Bosea sp. LC85 (50%)
2 1042 bp 65.36 4.82 65.36
SCNpilot_cont_300_bf_scaffold_57154
Species: Brevundimonas sp. EAKA (50%)
2 1049 bp 63.11 4.55 70.07
SCNpilot_cont_300_bf_scaffold_56907
Species: Mesorhizobium plurifarium (100%)
1 1054 bp 63.09 4.05 78.84
SCNpilot_cont_300_bf_scaffold_56663
Species: Brevundimonas diminuta (100%)
2 1059 bp 64.97 7.58 101.98
SCNpilot_cont_300_bf_scaffold_55144
Species: R_Brevundimonas_68_13 (100%)
1 1093 bp 67.98 4.82 94.42
SCNpilot_cont_300_bf_scaffold_54827
Species: Brevundimonas diminuta (100%)
1 1101 bp 58.58 2.96 48.50
SCNpilot_cont_300_bf_scaffold_54288
Species: Brevundimonas diminuta (100%)
2 1113 bp 65.68 5.64 99.46
SCNpilot_cont_300_bf_scaffold_53858
Species: Brevundimonas diminuta (100%)
2 1123 bp 68.48 5.59 99.38
SCNpilot_cont_300_bf_scaffold_53710
Species: Brevundimonas diminuta (100%)
2 1126 bp 67.94 4.90 91.92
SCNpilot_cont_300_bf_scaffold_53329
Species: Brevundimonas diminuta (50%)
2 1135 bp 62.03 3.76 78.24
SCNpilot_cont_300_bf_scaffold_52865
Species: Sphingopyxis sp. LC81 (100%)
1 1144 bp 58.65 3.95 99.91
SCNpilot_cont_300_bf_scaffold_52035
Species: Brevundimonas diminuta (100%)
2 1161 bp 67.61 7.78 86.05
SCNpilot_cont_300_bf_scaffold_51462
Species: Brevundimonas diminuta (100%)
1 1172 bp 66.55 4.07 99.83
SCNpilot_cont_300_bf_scaffold_50262
Species: Brevundimonas diminuta (100%)
2 1196 bp 64.80 5.25 68.73
SCNpilot_cont_300_bf_scaffold_49960
Species: Brevundimonas diminuta (50%)
2 1201 bp 70.36 5.02 79.93
SCNpilot_cont_300_bf_scaffold_49328
Species: Brevundimonas diminuta (100%)
2 1214 bp 65.32 4.96 60.30
SCNpilot_cont_300_bf_scaffold_49180
Species: Brevundimonas sp. BAL3 (66.67%)
3 1217 bp 64.91 3.09 99.59
SCNpilot_cont_300_bf_scaffold_48712
Species: Novosphingobium sp. MD-1 (100%)
2 1225 bp 64.98 3.07 82.53
SCNpilot_cont_300_bf_scaffold_48048
Species: Brevundimonas diminuta (50%)
2 1238 bp 62.36 4.46 55.01
SCNpilot_cont_300_bf_scaffold_47346
Species: Brevundimonas abyssalis (100%)
1 1251 bp 72.18 5.42 99.76
SCNpilot_cont_300_bf_scaffold_47198
Species: R_Brevundimonas_70_19 (100%)
1 1254 bp 69.94 2.40 86.60
SCNpilot_cont_300_bf_scaffold_47147
Species: Brevundimonas diminuta (100%)
4 1255 bp 67.97 6.40 98.01
SCNpilot_cont_300_bf_scaffold_46851
Species: Brevundimonas diminuta (100%)
2 1261 bp 69.71 7.96 98.97
SCNpilot_cont_300_bf_scaffold_46309
Species: Brevundimonas sp. BAL3 (100%)
1 1270 bp 63.54 6.13 90.94
SCNpilot_cont_300_bf_scaffold_45214
Species: Brevundimonas diminuta (100%)
2 1292 bp 60.06 2.33 94.27
SCNpilot_cont_300_bf_scaffold_81421
Species: Brevundimonas diminuta (66.67%)
3 1297 bp 63.61 4.45 80.03
SCNpilot_cont_300_bf_scaffold_44599
Species: Brevundimonas diminuta (100%)
2 1305 bp 65.90 6.35 99.08
SCNpilot_cont_300_bf_scaffold_44099
Species: Brevundimonas diminuta (100%)
2 1316 bp 68.92 4.20 89.13
SCNpilot_cont_300_bf_scaffold_42323
Species: Brevundimonas diminuta (100%)
3 1355 bp 64.65 4.82 93.87
SCNpilot_cont_300_bf_scaffold_40228
Species: R_Alphaproteobacteria_66_14 (100%)
2 1404 bp 70.66 3.58 99.36
SCNpilot_cont_300_bf_scaffold_39836
Species: Brevundimonas subvibrioides (50%)
2 1414 bp 64.99 2.31 71.29
SCNpilot_cont_300_bf_scaffold_64391
Species: Methylobacterium aquaticum (50%)
2 1418 bp 63.33 4.60 103.46
SCNpilot_cont_300_bf_scaffold_39527
Species: Brevundimonas diminuta (100%)
3 1422 bp 66.88 7.41 92.62
SCNpilot_cont_300_bf_scaffold_39285
Species: Brevundimonas diminuta (100%)
3 1428 bp 65.90 5.27 95.38
SCNpilot_cont_300_bf_scaffold_70393
Species: Brevundimonas diminuta (100%)
2 1472 bp 64.61 5.63 80.50
SCNpilot_cont_300_bf_scaffold_36204
Species: Brevundimonas diminuta (100%)
3 1510 bp 66.23 5.98 98.15
SCNpilot_cont_300_bf_scaffold_35758
Species: Brevundimonas diminuta (100%)
2 1522 bp 62.09 5.44 74.11
SCNpilot_cont_300_bf_scaffold_35367
Species: Brevundimonas diminuta (66.67%)
3 1533 bp 60.47 25.87 94.72
SCNpilot_cont_300_bf_scaffold_33570
Species: Brevundimonas diminuta (100%)
2 1591 bp 69.20 6.15 99.94
SCNpilot_cont_300_bf_scaffold_32985
Species: Brevundimonas diminuta (100%)
1 1610 bp 70.43 6.08 99.88
SCNpilot_cont_300_bf_scaffold_32632
Species: Brevundimonas sp. BAL3 (50%)
4 1621 bp 65.52 2.79 100.12
SCNpilot_cont_300_bf_scaffold_68366
Species: Brevundimonas sp. BAL3 (50%)
2 1626 bp 52.40 4.48 92.80
SCNpilot_cont_300_bf_scaffold_60400
Species: Brevundimonas subvibrioides (50%)
2 1635 bp 63.91 3.22 76.51
SCNpilot_cont_300_bf_scaffold_54818
Species: Brevundimonas diminuta (100%)
3 1639 bp 68.70 5.51 60.40
SCNpilot_cont_300_bf_scaffold_31907
Species: Brevundimonas diminuta (50%)
2 1644 bp 57.66 4.73 82.12
Displaying items 1-50 of 418 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.