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SCNpilot_cont_300_bf_scaffold_38223_1

Organism: SCNPILOT_CONT_300_BF_Actinomycetales_68_5_fragment

partial RP 17 / 55 BSCG 20 / 51 ASCG 5 / 38
Location: comp(2..2065)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 66.6
  • Coverage: 539.0
  • Bit_score: 673
  • Evalue 4.30e-190
DNA-directed RNA polymerase subunit beta' n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XBL0_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 66.6
  • Coverage: 539.0
  • Bit_score: 673
  • Evalue 3.00e-190
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 66.6
  • Coverage: 539.0
  • Bit_score: 673
  • Evalue 8.60e-191

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Taxonomy

Nakamurella multipartita → Nakamurella → Nakamurellales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2064
CCGGTGATGCTCAACCGGGCGCCGACCCTGCACCGCCTCGGCATCCAGGCGTTCGAGCCGCAGTTGGTCGAGGGTAAGGCGATCCAGCTGCACCCGCTGGTGTGTGCGGCCTTCAACGCCGACTTCGACGGCGACCAGATGGCGGTGCACCTGCCGCTCTCCGCGGAGGCGCAGGCCGAGGCCCGCATCCTGATGCTGTCCTCCAACAACATCCTGTCCCCGGCGCACGGCCAGCCGCTGGCCATGCCGTCGCTGGACCTGGTCACGGGTCTGTACTACCTGTGCGGCAAGGACGAGTCGGCAGCCGGTGCGGGGCATGTGTTCTCGTCGTCGGCGGAGGCGATCATGGCCCGCGACGCCGGCCTGATCGACCTGCGCAGTCCGGTAAAGATCAGGCTGACCGGGGTGATCCCGGGCGCGGATGACCGCGAGAACCTGCCGGACGATTTCACCGACGGCGACCCGTGGATCGCCGACACCACTCTCGGCCGGGTGCTGTTCAACGAGCTGTTGCCGGCGGCCTACCCGTTCGTCAACGAGGAGTTGCCGAAGAAGCGGCAGGCGGCGATCGTCAACCAGCTCGCGCAGGAGTACCCGATCTCCGTGGTCGCGCAGACGCTGGACAAGCTCAAGGAGGCCGGCTTCTACTGGGCCACCCGCTCCGGCATGACGGTCGCCATCCGGGACGTCGTCATCCCGGAGGCGAAGGCCGAGATCATGTCCCGGCACGAGGGTCTCGTCGCGGGGGTGGAGAAGAAGTACCAGCGCGGTCTGGTGTCGTACCAGGAGCGCAACGACGAACTCGTGCGGATCTGGGAGGACGCGACCAAGGAGATCGAGGGCGCGATCCAGAAGGCCTACCCGAAGGGCAACTCGGTCTACACCCTGGTGGCGGCCGGTGCGGCCGGCAACTGGATCCAGGTGCGGTCGCTGTCCGGCATGAAGGGCATCGTCACCAACTCGAAGGGTGAGCAGATCCCGCGGCCGATCCGCAACTCGTTCCGCGAGGGCCTGTCCGTGCTGGAGTACTTCATCAACACGCACTCGGCGCGAAAGGGCCTGGCGGACACGGCGCTGCGCACCGCCGAGGCCGGGTACCTGACCCGCCGACTGGTCGACGTGTCGCAAGACGTCATCGTCCGCGAGGAGGACTGCGGCACCGAACGCGGCGTCGTCCTGCCGATCACCACGGACGACGGCACCGGCGCCCGGGTACGCGCGGACCACCTCGACACGAAGGTGGAGGCGCGGATCCTCGCCGCTGACATCATCGGCGTCGAAGGGCCCGCCAAGGGCACGGTCGTGGTCGAGGCCGGCACGGATCTGCGCGCCGCGCACATCGACGCCGCGATCGACGCCGGCGTGCACGAGATCCGGGTCCGCTCGGTGCTCACCTGCGAGGCAGCGCTCGGCGCCCGCCCAGTCCATCGGCGAGCCCGGCACGCAGCTCACCCTGCGTACGTTCCACTCGGGTTCGGCGTCGGGTGCGGACGACATCACGCAGGGTCTGCCGCGTGTGCAGGAGCTGTTCGAGGCGCGGGTGCCGAAGGGCAAGGCGCCGATCGCCGATGCGGCCGGCCGGGTGCGGATCGAGGACGACGACAAGTTCTACAAGATCACCATCATCCCGGACGACGGCAGCGACGAGGTCGTCTACGAGAAGTTGCCGCGCGCGAAGCGGCTGGCCACGGTCAAGATCGACGGGGTCGAGCGGCCGCTGGAGGACGGCGACCCGGTCGAGGTCGGTTTCCAGCTGCAGGACGGCAACCCGGATCCGCACGAGGTGTTGCGCATCATGGGTCCGCGCCGGGTGCAGTTGCACCTGGTCGACGAGGTGCAGAAGGTGTACCAGTCGCAGGGTGTGGCGATCCACGACAAGCACATCGAGGTCATCGTGCAGCAGATGCTGCGCCGGGTGACGATCATCGACTCCGGCTCGACCGAGTTCCTGCCGGGCGCGGTGATCGAGCGTCGCGAGTTCGAGGCGGCGAACCGCGCGGTGCTGGCCTCGGGCGGGGAGGCGGCCGCAGGCCGTCCCGCGCTGATGGGCATCACCACGGCCTC
PROTEIN sequence
Length: 688
PVMLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQMAVHLPLSAEAQAEARILMLSSNNILSPAHGQPLAMPSLDLVTGLYYLCGKDESAAGAGHVFSSSAEAIMARDAGLIDLRSPVKIRLTGVIPGADDRENLPDDFTDGDPWIADTTLGRVLFNELLPAAYPFVNEELPKKRQAAIVNQLAQEYPISVVAQTLDKLKEAGFYWATRSGMTVAIRDVVIPEAKAEIMSRHEGLVAGVEKKYQRGLVSYQERNDELVRIWEDATKEIEGAIQKAYPKGNSVYTLVAAGAAGNWIQVRSLSGMKGIVTNSKGEQIPRPIRNSFREGLSVLEYFINTHSARKGLADTALRTAEAGYLTRRLVDVSQDVIVREEDCGTERGVVLPITTDDGTGARVRADHLDTKVEARILAADIIGVEGPAKGTVVVEAGTDLRAAHIDAAIDAGVHEIRVRSVLTCEAALGARPVHRRARHAAHPAYVPLGFGVGCGRHHAGSAACAGAVRGAGAEGQGADRRCGRPGADRGRRQVLQDHHHPGRRQRRGRLREVAAREAAGHGQDRRGRAAAGGRRPGRGRFPAAGRQPGSARGVAHHGSAPGAVAPGRRGAEGVPVAGCGDPRQAHRGHRAADAAPGDDHRLRLDRVPAGRGDRASRVRGGEPRGAGLGRGGGRRPSRADGHHHGL