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SCNpilot_cont_300_bf_scaffold_1610_17

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial

partial RP 37 / 55 MC: 1 BSCG 34 / 51 MC: 3 ASCG 8 / 38 MC: 2
Location: comp(11941..13008)

Top 3 Functional Annotations

Value Algorithm Source
Alanine racemase n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CJ23_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 349.0
  • Bit_score: 381
  • Evalue 9.40e-103
  • rbh
Alanine racemase {ECO:0000313|EMBL:EFO31390.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.7
  • Coverage: 349.0
  • Bit_score: 381
  • Evalue 1.30e-102
regulatory protein LacI similarity KEGG
DB: KEGG
  • Identity: 58.6
  • Coverage: 333.0
  • Bit_score: 379
  • Evalue 1.30e-102

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Taxonomy

Roseibium sp. TrichSKD4 → Roseibium → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1068
ATGGCCGACCGGGAGAAGCCTGCGGATGCGCAGGGCGACGCGCTCCTGCCGACGCTGCCGCAGCGCGGATTGACGTTGCGCATGCTCGGCGATCGGCTCGGCCTGTCGACGGCGACCGTCTCGCTGGCCCTGCGGGATTCTCCGCTCGTCGCCGAGCAGACCCGGATCCGCGTCCGCGCCCTCGCCGACGAGATCGGCTATGTCGCGAACCGGTCGGCGGCGAGCCTGCGCACGGCACGGACCAATATGGTCGGCGTGGTCGTGCACGACGTCGTGAACCCCTATTTCGCCGAGATCTTCCGGGCGCTCGAGGCGGAGCTGAACGCGCAGTCGCTGGCGATCATGATCTGCAACCACGCCGACGATGTGCGGCGGCAGCGCACCTTCGTCGAGACGCTGATGCAGCATCGCGCCGACGGGCTCATCATGTGCCCCTCGGTCGGAACCGAGCCGGCCGAGGTGCTGCGCGTCGCGCGCAGCGGGCTGCCGCTCGTGATGATCTGCCGCGACATCGGCGAGATCGGCGTGCCGGTGGTGCGCGGCGACGATTTCGCCGGAGCGCTCGCGCTGACGCGCCACCTGATCGAGCGGGGACATCGGCGCATCGCCTTCGTCGGCGGCCGCCGGCAGACGAGCGCCGGCCGCGAACGCCACGCCGGCTATGTCGCCGCCCATGCGGAAGCGGGAATCGAGATCGATCCGGCGCTCGATGTTCCCGAGGCGATGACGCAACGCGCGGGCCGCGACGCGGTGGCGGGCCTGCTCGCGCTGTCGCGGCGGCCGACGGCGATCTTCGGCTTCAACGACCTCGTCGCATTGGGGCTCATGTCGGCGCTGCGCCGGCATGGGATCGAGCCGGGGCGGGACATCGCGGTCGCCGGATATGACAATACGGATGGTGCCGCCTGGACCACGCCGGCGCTGACCTCGGTCGACAATGTTCCCGGGCCCATCGGCGCGACGGCGGCGGCGCTGCTGCGCGACCAGATCGCCGGGCTCCCCGTGCGCACGGAGCGGATCCTGATCGCGCCGGAACTGATCGTGCGGGAATCGACCCGTCCCAACTGA
PROTEIN sequence
Length: 356
MADREKPADAQGDALLPTLPQRGLTLRMLGDRLGLSTATVSLALRDSPLVAEQTRIRVRALADEIGYVANRSAASLRTARTNMVGVVVHDVVNPYFAEIFRALEAELNAQSLAIMICNHADDVRRQRTFVETLMQHRADGLIMCPSVGTEPAEVLRVARSGLPLVMICRDIGEIGVPVVRGDDFAGALALTRHLIERGHRRIAFVGGRRQTSAGRERHAGYVAAHAEAGIEIDPALDVPEAMTQRAGRDAVAGLLALSRRPTAIFGFNDLVALGLMSALRRHGIEPGRDIAVAGYDNTDGAAWTTPALTSVDNVPGPIGATAAALLRDQIAGLPVRTERILIAPELIVRESTRPN*