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SCNpilot_cont_300_bf_scaffold_1955_13

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial

partial RP 37 / 55 MC: 1 BSCG 34 / 51 MC: 3 ASCG 8 / 38 MC: 2
Location: comp(11126..12016)

Top 3 Functional Annotations

Value Algorithm Source
Transketolase, beta subunit n=1 Tax=Pseudomonas sp. GM60 RepID=J3B2P7_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 81.7
  • Coverage: 295.0
  • Bit_score: 500
  • Evalue 8.90e-139
  • rbh
Transketolase, beta subunit {ECO:0000313|EMBL:EJM76698.1}; TaxID=1144334 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas s similarity UNIPROT
DB: UniProtKB
  • Identity: 81.7
  • Coverage: 295.0
  • Bit_score: 500
  • Evalue 1.20e-138
transketolase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 79.7
  • Coverage: 295.0
  • Bit_score: 492
  • Evalue 8.90e-137
  • rbh

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Taxonomy

Pseudomonas sp. GM60 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
ATGTCGTCGCCCGGCGGATCTGCCGCCCTGCATGGCCAAAACGACTTCACGCCGACGGCCGAAACGGTCGCGATGCTGAAGGAAAAGGCGAAGTTCGTCCGCCTCGAGACGATCCGGCTGATCGATATCGCCAAGACGGGGCATTACACCTCCGTCTTCTCGGCGGCGGAGATCTTCGCGGCGCTCTATTATGACGTCATGAAGATCCGGCAGGGCGAGCCGAAATGGCCCGGCCGCGATCGGTTCCTCATGGGCAAGGGCCATGCGGCGGTCGGCCAGTTCCCGATCCTCGCCGAGCTCGGCTTCTTCCCGAAGGAATGGCTCGACGATTATACCCGCCTCGGCAGCCCGCTCGGGGACCATCCAGACATGCGCAAGGTGCCGGGCGTCGACTTCTCGTCGGGCTCGATCGGCCATGCCCTCTCGGGCGGCCTCGGCATGGTGCTGGCCCAGCGCTTCACCGGCGAGACCTATAATGTGTTCGCGCTGCTCGGCGATGGCGAGATGCAGGAGGGCCAGGTCTGGGAGGCCGCGCTTTCGGCCGCCGCGCACAAGGCCTCGCGGCTGATCGCGATCGTCGACCGCAATGGCTACCAGCTCGACGGCAAGGTCGACGACGTCATCGGCATCGAGCCGCTGGACGAGAAGTGGCGCGCCTTCGGCTGGGAGGTGCATGTCGTCAACGGGCATGACGTCGCCGCGCTGACGGAGCTGCTCCGCCGCGTTGCGGCCGACACGGCCCGCACCAAGCCGTGCTGCATCATCGCGAAGACCATGAAGGGCAAGGGCGTTTCCTACATGGAGACGGAGCCGGGCTGGCATCTCGGCTGGCTGGACCCCGAAGACGCCAAGCGCGCCATCGACGAGATCGAAGCCAGGGAGATTGGATGA
PROTEIN sequence
Length: 297
MSSPGGSAALHGQNDFTPTAETVAMLKEKAKFVRLETIRLIDIAKTGHYTSVFSAAEIFAALYYDVMKIRQGEPKWPGRDRFLMGKGHAAVGQFPILAELGFFPKEWLDDYTRLGSPLGDHPDMRKVPGVDFSSGSIGHALSGGLGMVLAQRFTGETYNVFALLGDGEMQEGQVWEAALSAAAHKASRLIAIVDRNGYQLDGKVDDVIGIEPLDEKWRAFGWEVHVVNGHDVAALTELLRRVAADTARTKPCCIIAKTMKGKGVSYMETEPGWHLGWLDPEDAKRAIDEIEAREIG*