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SCNpilot_cont_300_bf_scaffold_2403_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial

partial RP 37 / 55 MC: 1 BSCG 34 / 51 MC: 3 ASCG 8 / 38 MC: 2
Location: comp(2377..3288)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Kaistia granuli RepID=UPI000378EA7A similarity UNIREF
DB: UNIREF100
  • Identity: 91.4
  • Coverage: 301.0
  • Bit_score: 552
  • Evalue 2.60e-154
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 288.0
  • Bit_score: 477
  • Evalue 1.20e-131
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 80.3
  • Coverage: 289.0
  • Bit_score: 474
  • Evalue 2.00e-131

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Taxonomy

Labrenzia sp. C1B10 → Labrenzia → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGGCTGCCAAGGCAAGTCTTCCCGTCATCGCGTCGGGCGAAGCGGGACTATCGCGCTATCTCGAAGAGATCAGGCGCTTCCCGATGCTGTCGCCTGACGAGGAATATATGCTCGCCAAGGCGTATAAGGAACATGACGACCGCACTGCCGCGCATCGGCTGGTGACGAGCCATCTGCGTCTCGTCGCCAAGATCGCGATGGGCTATCGCGGCTATGGCCTGCCCATCGGCGAGGTGATCTCCGAAGGCAATGTCGGCCTTATGCAGGCCGTGAAGCGTTTCGAGCCCGAAAAGGGGTTCCGCCTCGCGACCTATGCCATGTGGTGGATCAAGGCCTCGATCCAGGAATATATCCTGCGCTCGTGGAGCCTCGTGAAGATGGGCACTACGGCGAACCAGAAGCGGCTGTTCTTCAATCTGCGCAAGATGAAGAGCCAGATCCAGGCGCTGGAAGAGGGTGATCTCCGCCCCGACCAGGTCGAGCAGATCGCGACCAAGCTGGGCGTCACCAACGAGGACGTCATCTCGATGAACCGCCGGCTCGGCGGCGACACCTCGCTGAACGCGCCGCTGCGCGCCGACATCGAGGGCGGCGAATGGCAGGACTGGCTGGTCGACGACAGCGACGACCAGGAGACGGTGCTCGCCAACCAGGAAGAGGCCGATAACCGCCGCAAGCTGCTGCGCGACGCGATGAGCGTCCTCAACGAGCGCGAACGCCGCATCTTCGAGGCGCGCCGCCTCGCCGAGGAGCCGATCACGCTGGAGGAACTCTCCGGCGAGTTCGGCGTCAGCCGCGAGCGCGTGCGCCAGATCGAGGTGCGCGCGTTCGAGAAGGTGCAGAAGGCCGTGCGGCGGGGCGCCAAGGAGATGGAGCGCACCCACGACGAGGACGACCTCGCCGAGGCCTGA
PROTEIN sequence
Length: 304
MAAKASLPVIASGEAGLSRYLEEIRRFPMLSPDEEYMLAKAYKEHDDRTAAHRLVTSHLRLVAKIAMGYRGYGLPIGEVISEGNVGLMQAVKRFEPEKGFRLATYAMWWIKASIQEYILRSWSLVKMGTTANQKRLFFNLRKMKSQIQALEEGDLRPDQVEQIATKLGVTNEDVISMNRRLGGDTSLNAPLRADIEGGEWQDWLVDDSDDQETVLANQEEADNRRKLLRDAMSVLNERERRIFEARRLAEEPITLEELSGEFGVSRERVRQIEVRAFEKVQKAVRRGAKEMERTHDEDDLAEA*