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SCNpilot_cont_300_bf_scaffold_554_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

near complete RP 43 / 55 MC: 3 BSCG 43 / 51 MC: 2 ASCG 11 / 38
Location: comp(1..2109)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:AJP72130.1}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule: similarity UNIPROT
DB: UniProtKB
  • Identity: 91.6
  • Coverage: 703.0
  • Bit_score: 1294
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037A8279 similarity UNIREF
DB: UNIREF100
  • Identity: 91.0
  • Coverage: 712.0
  • Bit_score: 1290
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 91.6
  • Coverage: 703.0
  • Bit_score: 1294
  • Evalue 0.0

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2109
ATGGCAACCAAGGCGATCGAGGGCGCGACCACGCCCAAGCGGCGCATCCGCAAGGTGTTCGGCAACATCCACGAAGTGGTGCAGATGCCGAACCTCATCGAGGTCCAGCGCGAGAGCTACGAACAGTTCCTGCGCTCCGATCCCTCGATCGGCTATGTCTCCGGTCTGGAAAAGACGCTGCGCAGCGTGTTCCCGATCCGCGATTTCGCCGGCACCGCCGAGCTCGATTTCGTCAATTACGAACTCGAGCCGCCGAAGTTCGACGTCGAGGAATGCCGTCAGCGCGGCATCACCTATGCGGCGCCGATGCGCGTCACGTTGCGCCTGATCGTGTTCGAGGTGGATCCGGATACGGAAACCCGCTCGGTGCTCGATATCAAGGAGCAGGACGTCTACATGGGCGACATGCCGCTCATGACCGAGAACGGCACCTTCTTCATCAACGGCACCGAACGCGTCATCGTCAGCCAGATGCACCGCTCGCCGGGCGTGCTGTTCGATCACGATCGCGGCAAGACCCACGCGTCGGGCAAATATCTGTTCGCGGCGCGGGTGATCCCGTATCGCGGCTCGTGGCTCGATTTCGAGTTCGACGCCAAGGATATCGTCAACGTCCGTATCGACCGTAAGCGTAAGCTTCCGGTGACGGCGCTGCTTTATGCGCTCGGCCTCAACTCCGAGGAAATCCTCAACCATTTCTACAACCGCCTCACCTTCGTCCGCGGCGAAGGCGGGTGGAAGATCCCGTTCCAGGCGGAAAGCTGGCGCGGCGTGAAGCCGATGTTCGACATCGTCGACGCCAATTCGGGCGAGATCGTCTTCCCGGCCGGGCAGAAGATTTCCCCGCGCGCCGCGAACAAGGCGTCGAAGGACGGCCTCACCGACCTCTTGATCCCGACCGAGGAAATCTTCGGCCGTTATTCGGCCTATGACCTGATCAACGAAGCGACCGGCGAGATCTACGTCGAGGCGGGCGACGAGATTTCGCCCGAGAACCTCGAAAAGCTCGACAAGGCGGGCGTCGATCGCATCGAATTGCTCGATATCGATCACGTCACCACCGGGCCATGGATCCGCAACACGCTCAAGGCCGACAAGGCCGAGGAGCGCGAGCAGGCACTGTCCGACATCTATCGCGTGATGCGCCCCGGCGAGCCGCCGACGCTGGAGACCGCCGAGGCGTTGTTCGCCGGGCTGTTCTTCGATCCGGACCGCTACGACCTGTCGGCGGTGGGCCGCGTCAAGCTCAACATGCGCCTCGATCTCGACACCGATGACAGCGTCACGACGCTGCGCACCGAGGATATCCTCGCGGTGGTCAAGACCCTCGTCGACCTGAAGGACGGCAAGGGCGAGATCGACGACATCGACAATCTCGGCAACCGCCGCGTGCGTTCGGTGGGCGAGTTGCTCGAGAACCAGTATCGCGTCGGCCTGCTGCGCATGGAACGCGCGGTGAAGGAGCGCATGTCGTCGGTCGACGTGTCGACGGTGATGCCGAACGACCTGATCAACGCCAAGCCGGCGGTCGCCGCGGTGCGCGAATTCTTCGGCTCGTCGCAGCTGTCGCAGTTCATGGACCAGACCAACCCGCTCTCCGAAGTGACGCACAAGCGTCGCGTCTCGGCGCTCGGGCCGGGCGGTCTCACCCGCGAGCGCGCGGGCTTCGAGGTCCGCGACGTTCACCCGACGCATTACGGCCGTATCTGCCCGATCGAGACGCCGGAAGGCCCGAACATCGGCCTGATCAACAGCCTCGCCTCGTTCAGCCGCGTCAACAAATACGGCTTCATCGAGACGCCCTACCGTCGCGTGGTCGACGGCAAGGTGACCGGCGAGGTCGTCTATCTCTCCGCGATGGAGGAGGCGAAGCACACGATCGCGCAGGCCAACGCCGAAGTCGATCGTGACGGCCGGCTGATCGAGGAACTGATCTCGGCGCGTCAGGCCGGCGAATTCCTGATGGCGCTGCCCGAGACGATCACGTTGATGGACGTGTCGCCGAAGCAGCTCGTCTCGGTCGCCGCCTCGCTGATCCCGTTCCTCGAGAACGACGACGCGAACCGCGCGCTGATGGGCTCGAACATGCAGCGCCAGGCGGTGCCGCTG
PROTEIN sequence
Length: 703
MATKAIEGATTPKRRIRKVFGNIHEVVQMPNLIEVQRESYEQFLRSDPSIGYVSGLEKTLRSVFPIRDFAGTAELDFVNYELEPPKFDVEECRQRGITYAAPMRVTLRLIVFEVDPDTETRSVLDIKEQDVYMGDMPLMTENGTFFINGTERVIVSQMHRSPGVLFDHDRGKTHASGKYLFAARVIPYRGSWLDFEFDAKDIVNVRIDRKRKLPVTALLYALGLNSEEILNHFYNRLTFVRGEGGWKIPFQAESWRGVKPMFDIVDANSGEIVFPAGQKISPRAANKASKDGLTDLLIPTEEIFGRYSAYDLINEATGEIYVEAGDEISPENLEKLDKAGVDRIELLDIDHVTTGPWIRNTLKADKAEEREQALSDIYRVMRPGEPPTLETAEALFAGLFFDPDRYDLSAVGRVKLNMRLDLDTDDSVTTLRTEDILAVVKTLVDLKDGKGEIDDIDNLGNRRVRSVGELLENQYRVGLLRMERAVKERMSSVDVSTVMPNDLINAKPAVAAVREFFGSSQLSQFMDQTNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLASFSRVNKYGFIETPYRRVVDGKVTGEVVYLSAMEEAKHTIAQANAEVDRDGRLIEELISARQAGEFLMALPETITLMDVSPKQLVSVAASLIPFLENDDANRALMGSNMQRQAVPL