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SCNpilot_cont_300_bf_scaffold_648_21

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

near complete RP 43 / 55 MC: 3 BSCG 43 / 51 MC: 2 ASCG 11 / 38
Location: comp(19541..20257)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B446E6 similarity UNIREF
DB: UNIREF100
  • Identity: 79.2
  • Coverage: 231.0
  • Bit_score: 346
  • Evalue 2.90e-92
RNA polymerase sigma 70 similarity KEGG
DB: KEGG
  • Identity: 79.6
  • Coverage: 216.0
  • Bit_score: 334
  • Evalue 2.50e-89
RNA polymerase sigma 70 {ECO:0000313|EMBL:AJP72032.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s similarity UNIPROT
DB: UniProtKB
  • Identity: 79.6
  • Coverage: 216.0
  • Bit_score: 334
  • Evalue 1.20e-88

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 717
TTGCGCCTGCACGCCTATCTTATAAATACAGACCGGGCAGAGCCGGTTGCGACGGGGAATGATCGCGACATCATGACGCAAGATCCATCGCAGGATGATGGGGCGGATGTGACGTCGCCTGCCGGGCACGTCGCGCTTTCCGACCCCGAGTTCAAGGCCGAGCTGGCGCAGGTCATTCCGCACCTGCGCGCCTTCGGCCGATCGCTTTCGGGTAACCGCGATCTCGCGGACGATCTGGTGCAGGAGACGCTGCTCAAGGCCTGGGCGGCGCGCAAGCGCTTTCAGGCCGGCACCAATATGCGCGCCTGGACCTTCATCATCCTGCGCAACCTTTATCTGTCGCAGATGCGGCGCTCGCGCTTCCGTGGCGAGTGGGACGATCTCGTCGCCGATCGGCTGCTCGCCGCGCCGGCGGGGCAGGACAAGCATGTCGAGCTTGCCGACATGCAGCGCGCCTTGCTGATGCTGCCGCAACCGCAGCGCGAGGCGTTGATCCTCGTCGGTGCCGGCGGCTTCGCTTATGAAGAGGCGGCCGAAATCTGCGGGGTTGCGGTCGGCACGATCAAGAGCCGTGTCGCGCGCGGCCGCGTCGCGCTCGAGGCGCTGATGAGCGGTCGCGACATGACCGGCCGCACCGGGCAGAAGGGCGACGATTCGGGTCGCACGACGCTCGATACGATCATGCACGAAGTGGACGAACTGAGCCGGGATCGCTGA
PROTEIN sequence
Length: 239
LRLHAYLINTDRAEPVATGNDRDIMTQDPSQDDGADVTSPAGHVALSDPEFKAELAQVIPHLRAFGRSLSGNRDLADDLVQETLLKAWAARKRFQAGTNMRAWTFIILRNLYLSQMRRSRFRGEWDDLVADRLLAAPAGQDKHVELADMQRALLMLPQPQREALILVGAGGFAYEEAAEICGVAVGTIKSRVARGRVALEALMSGRDMTGRTGQKGDDSGRTTLDTIMHEVDELSRDR*