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SCNpilot_cont_300_bf_scaffold_680_24

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

near complete RP 43 / 55 MC: 3 BSCG 43 / 51 MC: 2 ASCG 11 / 38
Location: comp(22744..23073)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein trbc n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NCP4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 104.0
  • Bit_score: 168
  • Evalue 5.10e-39
Conjugal transfer protein trbc {ECO:0000313|EMBL:EAT08846.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingom similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 104.0
  • Bit_score: 168
  • Evalue 7.00e-39
conjugal transfer protein TrbC similarity KEGG
DB: KEGG
  • Identity: 79.4
  • Coverage: 107.0
  • Bit_score: 163
  • Evalue 2.70e-38

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Taxonomy

Sphingomonas sp. SKA58 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 330
GTGAACCATGCCCGTCTCCTGCCGCGCCGCGCCATTTCCCTGGTCGGCGCCGCATTCGCTCTTGTCATCTCGACCCGGGCCCGGGCGGCCGGCTCGGGCATGCCATGGGAGCAGCCGCTCCAGCAGGTCCTCGAGTCGGTTCAGGGTCCGGTCGCCAAAATCCTCGCGGTGATCGTCATTATCGTCACCGGTCTGACGCTCGCATTCGGCGAGACCGCCGGCGGGTTTCGCCGCCTGATCCAGATCGTGTTCGGTCTGTCGATCGCTTTCGCCGCGTCGAGCTTCTTCCTTTCGTTCTTCAGCTTCGGTGGTGGAGCGCTGATCGCATGA
PROTEIN sequence
Length: 110
VNHARLLPRRAISLVGAAFALVISTRARAAGSGMPWEQPLQQVLESVQGPVAKILAVIVIIVTGLTLAFGETAGGFRRLIQIVFGLSIAFAASSFFLSFFSFGGGALIA*