ggKbase home page

SCNpilot_cont_300_bf_scaffold_1193_21

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

near complete RP 43 / 55 MC: 3 BSCG 43 / 51 MC: 2 ASCG 11 / 38
Location: 28024..30540

Top 3 Functional Annotations

Value Algorithm Source
penicillin-binding protein n=1 Tax=Sphingomonas melonis RepID=UPI0003770267 similarity UNIREF
DB: UNIREF100
  • Identity: 75.9
  • Coverage: 842.0
  • Bit_score: 1315
  • Evalue 0.0
  • rbh
Transglycosylase family protein {ECO:0000313|EMBL:EZP55339.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphing similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 838.0
  • Bit_score: 1323
  • Evalue 0.0
penicillin-binding protein similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 840.0
  • Bit_score: 1318
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2517
ATGGCGTCTTCTCCCCCTGAACCCGAAACGACCCTCAAGCTGCGCCGCGATGCCGGCCATTGGCGGCGGTCGCTGCGTGAGGCGTGGGCGAAGCGCTGGGTCAAGATCGGCGCGGCGGTCGCGGTGCTGGCGGCGATCGCTTATGGGGTGTTCTGGTTCGCGATCGCACGCGATCTGCCGTCGGTCGATCAGCTGCGCACCTATGAGCCGCCGCTGCCGACCAACGTGCGCGGCGGCGACGGCACGCCGATCTATTCCTATGCGCGCGAACGCCGTGTCGAACTGTCGTTCGCCGAATATCCGCCACAGCTGATCCACGCTTTCCTGTCTGCGGAGGACAAGACCTTCTTCGAGCATCACGGCGTCGATTACCCCGGGCTTGCCGGCGCGGTAGTCGATTATGTGTCGAAGATGGGATCGGGCCGGCGCGCCAAGGGCGGGTCGACGATCACCCAGCAGGTCGCGAAGAACCTGCTGATCGGCAATGCTTATTCCCCGACGCGCAAGATGCGCGAGGCGGTGCTGGCGTGGCGTATCGAGGATTCGCTGAGCAAGCAGCAGATCCTCGAACTCTATCTCAACCAGATCTTCCTCGGGCGGAACGCTTATGGCGTCGAAGCGGCGAGCCACGCCTATTTCGACAAGGAGCTGACCGAGCTCAGCCTGCCGCAGATGGCCTATCTCGCCATATTGCCCAAGGGGCCGTCGAACTACGATCCGTTCCGCGACACCGATCGCGCAATCGCCCGCCGCAACTGGGTGCTCGGCGAGATGGAGAAGAACGGCTACATCACCGCCGCGCAAAGAGACGAAGCCCGCGCCGCGCCGATCGGCGCGATCATCCGCCGCACGCCGAAGTTCGAGCAGGTCGGCGGCTATTTCGTCGAGGAAGTCCGTCGCCAGCTGATCGGCAAATATGGCGAGACCGCGCGCGACGGGCCCAACAGCGTCTATTCGGGCGGCCTGTGGGTGCGCACCTCGCTCGATCCCAAGCTTCAGGCCTATGCTGCGCAGGCGCTGCGCGACGGGCTGGTGCGCTACGATCGCGGGCGTGGCTGGAACGGCCCGCTGCGGCATGTCGATTTCGAGGGCGATAGCTGGCTTGGGGCGCTCGCCAACACCAATATCAGCATCGATTACAACGACTGGCGCGCCGCAATCGCGATCGCGCGTGAGGGCGATGCGTGGCAGATCGGCTTCGCCAACGGCCAGACCGGATCGATGCCGCGCGATCTGGCGCAGATGCCGGTGCGCGGCAAGGGTGGCACCGCCTTCGCCGCGATTAAGCCGGGCGACATCATCGCGGTCGCGCCGCAGGGCGGGCAGTTCGCGTTGCGCGCGGTGCCCAAGGTCTCGGGCGGGTTCGTCGTGCAGGAGCCGGCGACCGGCCGCATCCTTGCGATGCAGGGCGGGTTCGATGCCTCGATCCAGTCGTTCAACCGCGCGACCCAGGCGATGCGTCAGCCGGGGTCGACGATCAAGCCGATCGTCTATTCCGCCGCGCTCGAACACGGCATGACCCCGGCGTCGATCATCGTCGACGGGCCGTTCTGCGTCTATCAGGGCGCGCGGCTGGGGCAGAAATGCTTCCGCAACTTCGGCAACAGCCGCGGCGCCGGCCCGCACACGATGCGCTGGGGCATCGAGCAATCGCGCAACCTGATGACGGTGCGCGCCGCCGCGCAAACCGGGATGACCAATGTCGTCGGGCTGATGAAGGCGATGAACATCGGCGATTACCAGCCCTATCTCTCCTATGCGCTCGGCGCGGGCGAGACGACGGTGATGCGGATGGTCAATGCCTATGGCGTGCTTGCCAATCAGGGCCGCTGGCATTCGCCGACGTTGGTCGATTTCGTCCAGGACCGTCACGGCAAGGTGATCTGGCCGGAGAATTGGCGCGCCTGCGATCGCTGCAACATGCCCGATTGGGACGGCAAGCCAATGCCGCGCCCCGGGCTGCGCGGGCGGCAGGTGGTCGATGCGATGACCGCCTATCAGATGATCCACATCACCGAGGGCGTGATCCAGCGCGGCACCGCGACCGTGCTGCGCGATCTCGATCGCCCGATGTTCGGCAAGACCGGCACCAATTCGGGGCCGACCGACGTGTGGTTCATCGGCGGCACCCCGCAAATGGTCGGTGGGCTCTATATGGGCTATGACGCGCCGACCAGCCTCGGCGGCTATGCCCAGGGCGGCACGATGGCCGCGCCGATCTTCAAGGAATTCGCAGTCAAGGCGTTCGACGGACTGGAGAAACTGCCGTTCCGTGCGCCCCAGGGAATCCGCATGGTGCGCGTCGACCGCGCCTCGGGCCGTCCGGTGTTCGGCGCCTGGCCGGCCTTCGGCGAATATACCCCGGCGGTGATCTGGGAAGCGTTCAAGCCGCAGAGCGAGGCGCGCCGCGCACCGCGCCGGCCGGAAGCGGCGCCGACCGCCACCGCAACCAATGCCGCGCCGCGCGCACAGCCCGGCGATAGCGACTTCTTGCAGCGGCAGGGGGGGATTTACTAA
PROTEIN sequence
Length: 839
MASSPPEPETTLKLRRDAGHWRRSLREAWAKRWVKIGAAVAVLAAIAYGVFWFAIARDLPSVDQLRTYEPPLPTNVRGGDGTPIYSYARERRVELSFAEYPPQLIHAFLSAEDKTFFEHHGVDYPGLAGAVVDYVSKMGSGRRAKGGSTITQQVAKNLLIGNAYSPTRKMREAVLAWRIEDSLSKQQILELYLNQIFLGRNAYGVEAASHAYFDKELTELSLPQMAYLAILPKGPSNYDPFRDTDRAIARRNWVLGEMEKNGYITAAQRDEARAAPIGAIIRRTPKFEQVGGYFVEEVRRQLIGKYGETARDGPNSVYSGGLWVRTSLDPKLQAYAAQALRDGLVRYDRGRGWNGPLRHVDFEGDSWLGALANTNISIDYNDWRAAIAIAREGDAWQIGFANGQTGSMPRDLAQMPVRGKGGTAFAAIKPGDIIAVAPQGGQFALRAVPKVSGGFVVQEPATGRILAMQGGFDASIQSFNRATQAMRQPGSTIKPIVYSAALEHGMTPASIIVDGPFCVYQGARLGQKCFRNFGNSRGAGPHTMRWGIEQSRNLMTVRAAAQTGMTNVVGLMKAMNIGDYQPYLSYALGAGETTVMRMVNAYGVLANQGRWHSPTLVDFVQDRHGKVIWPENWRACDRCNMPDWDGKPMPRPGLRGRQVVDAMTAYQMIHITEGVIQRGTATVLRDLDRPMFGKTGTNSGPTDVWFIGGTPQMVGGLYMGYDAPTSLGGYAQGGTMAAPIFKEFAVKAFDGLEKLPFRAPQGIRMVRVDRASGRPVFGAWPAFGEYTPAVIWEAFKPQSEARRAPRRPEAAPTATATNAAPRAQPGDSDFLQRQGGIY*