ggKbase home page

SCNpilot_cont_300_bf_scaffold_1193_30

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

near complete RP 43 / 55 MC: 3 BSCG 43 / 51 MC: 2 ASCG 11 / 38
Location: comp(38206..39402)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 416.0
  • Bit_score: 477
  • Evalue 2.60e-131
DNA-directed RNA polymerase subunit beta' n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IHA1_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 61.2
  • Coverage: 430.0
  • Bit_score: 470
  • Evalue 2.30e-129
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 64.1
  • Coverage: 435.0
  • Bit_score: 481
  • Evalue 2.10e-133

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium ummariense → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1197
TATGTCATGTTCGACGACGGCCATATCGTCTCCAAGGGCGATCGCATGGCCGAGTGGGATCCGTTCACCATGCCGGTGATCACCGAGACCGGCGGCACGGTGAAGTTCCAGGATCTCGTCGAGAACAAGACGCTGACCGAGCAGGTCGACGAAGCGACGGGCATCGCCCAGCGCGTCGTCACCGAGTTCCGCGCCGGTTCCAAGTCGAAGGAGGATCTGCGTCCGCGGATCACCCTGCTCGACGCGGGCTCGGGCGAGACCGCGCGCTACATGCTGGCGCCGGGTGCGGTGCTGTCGGTCGAGGACGGTGCGACGGTGCAGGCGGGTGACGTGCTGGCGCGTGTCGCGCGCGAAAGCGCCAAGACCCGCGACATCACCGGCGGTCTGCCGCGCGTCGCCGAGCTGTTCGAGGCGCGCAAGCCGAAGGAGAATGCGATCATCGCAAAGGTCTCCGGCCGTGTCGTGTTCGGCAAGGACTATAAGGCGAAGCGCAAGATCGGCATCCAGCCCGAGGATGGCGGCGACGTCGTCGAATATGAAGTGCTCGGGATCGAGCCGCTGGCGGAATATCTCGTCAGCGAAATCCAGGAAGTCTATCGACTGCAGGGCGTGAAGATCAACGACAAGCACATCGAGGTGATCGTTCGCCAGATGCTGCAGAAGGTCGAGATCACCGAGGCCGGCGACACCACCCTGCTCCCCGGCGAGCAGGTGGATCGCGAGGAGATGGACGAGGTCAACGCGAAGCTCGGCAAGGGCATGCAGCCCGCGCAGGGCAAGCCGATCCTCCTCGGCATCACCAAGGCGTCGCTGCAGACCCGCTCGTTCATCTCGGCCGCGTCGTTCCAGGAAACGACCCGCGTGCTCACCGAGGCGGCCGTGCAGGGCAAGCAGGACACGCTGATGGGGCTCAAGGAGAATGTCATCGTCGGCCGCCTGATCCCGGCGGGCACCGGCGCGGGCATGAACCGCCTCAGGGTCGCGGCATCGTCGCGCGATGCGGCGCTCCGCGTCCAGCAGCGCAAGCTCGCCGAGGCGATGGCGATCACCGCGCCGACCAGCGCGGCGGCCGAACATGCCGCCGAGCTGGCCCGCTCGCCGCGCGATGCGCAGGGCACCGGCCCGGACCCGCTCGCCGCAGTCGTCCCCTCGGGTGACGGCAGCGACGAGGCTGCGGGCGAATATCTGAACGACTGA
PROTEIN sequence
Length: 399
YVMFDDGHIVSKGDRMAEWDPFTMPVITETGGTVKFQDLVENKTLTEQVDEATGIAQRVVTEFRAGSKSKEDLRPRITLLDAGSGETARYMLAPGAVLSVEDGATVQAGDVLARVARESAKTRDITGGLPRVAELFEARKPKENAIIAKVSGRVVFGKDYKAKRKIGIQPEDGGDVVEYEVLGIEPLAEYLVSEIQEVYRLQGVKINDKHIEVIVRQMLQKVEITEAGDTTLLPGEQVDREEMDEVNAKLGKGMQPAQGKPILLGITKASLQTRSFISAASFQETTRVLTEAAVQGKQDTLMGLKENVIVGRLIPAGTGAGMNRLRVAASSRDAALRVQQRKLAEAMAITAPTSAAAEHAAELARSPRDAQGTGPDPLAAVVPSGDGSDEAAGEYLND*