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SCNpilot_cont_300_bf_scaffold_1168_26

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

near complete RP 43 / 55 MC: 3 BSCG 43 / 51 MC: 2 ASCG 11 / 38
Location: 22005..22298

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L28 n=1 Tax=Sphingobium sp. AP49 RepID=J2KYU4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 97.0
  • Bit_score: 179
  • Evalue 1.50e-42
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobi similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 97.0
  • Bit_score: 180
  • Evalue 1.60e-42
50S ribosomal protein L28 similarity KEGG
DB: KEGG
  • Identity: 88.7
  • Coverage: 97.0
  • Bit_score: 176
  • Evalue 2.70e-42

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Taxonomy

Sphingobium herbicidovorans → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 294
ATGTCGCGCATCTGCGAGCTGACCGGCAAGGGCCGGCAGGTGGGGCACAACGTTTCCCACGCGAACAACAAGACCAAGCGGACGTTCCTGCCCAACCTGCAGAACGTGACGCTGATCTCCGACACGCTGGAGAAGAGCGTGCGCCTGCGCGTCTCGACCCACGGCCTGCGCTCGGTGGAGCATAACGGCGGTCTCGACAATTGGCTGGTCAAGACCAGCGACGAGAAGCTGTCGCTGCGCGCCCGCCGCCTGAAGCGCGACATCGTCAAGAAGCGCGCCGCCGTCGCGGCCTGA
PROTEIN sequence
Length: 98
MSRICELTGKGRQVGHNVSHANNKTKRTFLPNLQNVTLISDTLEKSVRLRVSTHGLRSVEHNGGLDNWLVKTSDEKLSLRARRLKRDIVKKRAAVAA*