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SCNpilot_cont_300_bf_scaffold_1337_29

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

near complete RP 43 / 55 MC: 3 BSCG 43 / 51 MC: 2 ASCG 11 / 38
Location: 31143..32108

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 334.0
  • Bit_score: 451
  • Evalue 1.20e-123
tRNA pseudouridine synthase B n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000288EFC9 similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 326.0
  • Bit_score: 440
  • Evalue 1.50e-120
  • rbh
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 336.0
  • Bit_score: 423
  • Evalue 4.20e-116

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Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 966
GTGAACGGCTGGCTTGTCATCGATAAGCCGCTCGGCACCGGCTCGACCCAGGCGGTCGGCGCGGTGAAGCGCGCGCTGCGCGCAGGGGGCTATGGCAAGGCCAAGGTCGGGCACGGCGGGACGCTCGACCCGCTCGCCTCAGGAGTATTGCCGATCGCGCTTGGCGAGGCGACCAAGCTCGCCGGGCGAATGCTCGACAGCGACAAGAGCTACGATTTCACGATCCGCTTCGGCAGCGAGACCGATACGCTCGACGCCGAGGGCACGGTGATCGCGACCAGCGACGTGCGCCCCACCGCCGCCGCGCTCGCCGCGGTATTGCCGCGCTTCACCGGGCCGATCGCGCAGGTGCCGCCGGCCTATTCGGCGCTCAAGGTCGACGGCGCGCGCGCCTATGACCTCGCGCGTGCCGGCGAGGAAGTGACGCTCGCCAGCCGGAACGTGACGGTTCATTCCCTTGTCTGTCATCCCCGCGCAGGCGGGGATCCATTCGCGCAGGTCGTTGAAGAAGCCGCACCGGCAGCGGCAATGGATTCCCGCCTTCGCGGGAATGACGAGGTTCTGGAGGAAGTGACGCTGACGGCGCATGTCTCCAAGGGCACCTATATCCGCAGCCTTGCGCGCGATATCGCGCTGGCGCTTGGCACCGTAGGTCATGTCACCTATCTAAGACGCACCAAGGCTGGCCCGTTCGACCTCTCCCAGGCGATATCGCTGGACAAATTGGCCGAAATCGCTATGGGCCACGCGCTTGAACAATCTCTCCTGCCGTTGAGGGCAGCGCTGGACGACATCCCGGCACTTTCCCTCTCCCCCGATCAGGCAGGGGCGCTCCGCCAGGGGCGTGTTCTGGTCGGGATCGTCGCCGAGGATGGCTTGACCCTCGCGCTGCTCGGCGACGTGCCGGTGGCGCTGGTCGATGTGGTGGACCGCGAGGTCCGCGTCGTCCGCGGCTTCAACCTGTGA
PROTEIN sequence
Length: 322
VNGWLVIDKPLGTGSTQAVGAVKRALRAGGYGKAKVGHGGTLDPLASGVLPIALGEATKLAGRMLDSDKSYDFTIRFGSETDTLDAEGTVIATSDVRPTAAALAAVLPRFTGPIAQVPPAYSALKVDGARAYDLARAGEEVTLASRNVTVHSLVCHPRAGGDPFAQVVEEAAPAAAMDSRLRGNDEVLEEVTLTAHVSKGTYIRSLARDIALALGTVGHVTYLRRTKAGPFDLSQAISLDKLAEIAMGHALEQSLLPLRAALDDIPALSLSPDQAGALRQGRVLVGIVAEDGLTLALLGDVPVALVDVVDREVRVVRGFNL*