ggKbase home page

SCNpilot_cont_300_bf_scaffold_7479_1

Organism: SCNPILOT_CONT_300_BF_Flavobacterium_37_4_fragment

partial RP 2 / 55 BSCG 3 / 51 ASCG 3 / 38
Location: comp(1..525)

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1341181 species="Bacteria; Bacteroid similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 175.0
  • Bit_score: 323
  • Evalue 2.10e-85
topA; DNA topoisomerase I (EC:5.99.1.2) similarity KEGG
DB: KEGG
  • Identity: 90.3
  • Coverage: 175.0
  • Bit_score: 315
  • Evalue 1.20e-83
DNA topoisomerase I n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SRU2_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 175.0
  • Bit_score: 323
  • Evalue 1.50e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacterium limnosediminis → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 525
ATGGCAAAGAATTTAGTGATTGTTGAGTCGCCTGCAAAGGCAAAAACCATTGAGAAGTTTTTAGGGAGCGAATATCAGGTAGAGTCCAGTTATGGACATATAGCAGATTTGCCTTCTAAAGAAATAGGAGTAGATGTTGAAAATGGCTTTCTTCCAAAATATGAAGTTTCTCCTGATAAAAAAGCATTGGTGAAAAAACTCAAGGATCTTTCTAAAAAAGCAGATACGGTTTGGCTGGCGAGTGATGAGGATCGTGAAGGAGAAGCCATTTCGTGGCATTTGTCAGAAGAATTAAAGTTAGAACCATCAAAAACAAAAAGGATTGTTTTTCATGAAATTACCAAAACGGCAATCCAAAAAGCGATTGAGAATCCAAGAGGGATTAATTACGATTTGGTAAATGCGCAGCAGGCAAGAAGAGTCCTGGACAGATTGGTGGGTTATGAGCTTTCTCCGGTTTTATGGAGAAAAGTAAAAGGCGGGCTTTCTGCCGGAAGAGTACAGTCAGTTTCAGTAAGATTAATT
PROTEIN sequence
Length: 175
MAKNLVIVESPAKAKTIEKFLGSEYQVESSYGHIADLPSKEIGVDVENGFLPKYEVSPDKKALVKKLKDLSKKADTVWLASDEDREGEAISWHLSEELKLEPSKTKRIVFHEITKTAIQKAIENPRGINYDLVNAQQARRVLDRLVGYELSPVLWRKVKGGLSAGRVQSVSVRLI