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SCNpilot_cont_300_bf_scaffold_2891_1

Organism: SCNPILOT_CONT_300_BF_Hyphomicrobium_61_17_fragment

partial RP 9 / 55 BSCG 12 / 51 MC: 1 ASCG 3 / 38 MC: 1
Location: comp(3..254)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JUT0_HYPDA similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 84.0
  • Bit_score: 158
  • Evalue 2.30e-36
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 98.8
  • Coverage: 84.0
  • Bit_score: 158
  • Evalue 6.60e-37
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADJ24710.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 84.0
  • Bit_score: 158
  • Evalue 3.30e-36

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Taxonomy

Hyphomicrobium denitrificans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 252
ATGACTTTCGGAAAAATCGTAACGACGCTTGCGGTGATCGGCGCACTCGCCGGTGGCGGGTATCTCTTCATCGAGAAAAGGCAGACGGAAGCGATACAGGCCGAGCGCATGGAGGCTGCAAAACCGATAGCCGCCCCTGCCGTCACCGTTTCCAAAGTGACGACGAATGACTTTGTCGAGACGGCTGTGGTTTCCGGCTCGCTCATTCCGCGCGAGGAAATTCTCGTTTCGCCGGAGATCGAAGGCTTGCGC
PROTEIN sequence
Length: 84
MTFGKIVTTLAVIGALAGGGYLFIEKRQTEAIQAERMEAAKPIAAPAVTVSKVTTNDFVETAVVSGSLIPREEILVSPEIEGLR