ggKbase home page

SCNpilot_cont_300_bf_scaffold_7555_1

Organism: SCNPILOT_CONT_300_BF_Hyphomicrobium_61_17_fragment

partial RP 9 / 55 BSCG 12 / 51 MC: 1 ASCG 3 / 38 MC: 1
Location: comp(3..761)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JQK7_HYPDA similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 253.0
  • Bit_score: 496
  • Evalue 1.40e-137
  • rbh
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 98.4
  • Coverage: 253.0
  • Bit_score: 496
  • Evalue 4.00e-138
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADJ23961.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyp similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 253.0
  • Bit_score: 496
  • Evalue 2.00e-137

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hyphomicrobium denitrificans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 759
ATGACCTACGTCGTAGGCAAACGCGGCCATTCCGACGAGACGATTGTGAGCGTCTGCGATACGGAATTCTACTCCGCCCGTGACGGCTTTTCTGCGTTTCGAGAGATTGTCGCCGCTGCATTCATGCCATGGTTCATGGAGCACAAGTCGGACCAGGATTTTAACGCGCGCATTGTCAGATTGTCCGGGGAGTTCGGCTCTCTCTCGCGCACAAAGATGACGCCGTTACTCGGAATGCGCAACAAATCGGAGATCTCCAAAAGCCCGGAAGGCAGCCTCTATGCGAATTACGTAATTTCCGGACGCCTTGTCGTCACTCAGAATGACGTCACCGTCACAGCTGAGAAAGGTGACCTCGTCCTCTACGATAGCACGCTTCCGGTGAAGCATTTAAAGCTCGGCGATGCTTCATTCGAAGACCTCGCGTTCTGCATTCCGAAGGAGCGGATCGGACGAACCGACAAGACTTTCGACAATCTTCTCGTTTCGAAGGTCGACATCATCCCGCCACTGGCGAGCTGCTTCGCATTCCTGTCCCATAATATTTCGTCAGCTCAGCCTGAGGAATTGGCGGCGCTTGGGGGCGCATGCGCGGCGCTTTTGCCTATAAGCGGTGGGCGTTCACACGAATTCCGGCCCGACGGCATTGCCGAAGATGCCTCTAATCACTATGCGCGCGAGTTGGTACGCTTCATCGATGCTCGCATTGCGGATGCTGAACTGTGTCCCAGCATGGCGGCCGATAATCTCGGCATTTCT
PROTEIN sequence
Length: 253
MTYVVGKRGHSDETIVSVCDTEFYSARDGFSAFREIVAAAFMPWFMEHKSDQDFNARIVRLSGEFGSLSRTKMTPLLGMRNKSEISKSPEGSLYANYVISGRLVVTQNDVTVTAEKGDLVLYDSTLPVKHLKLGDASFEDLAFCIPKERIGRTDKTFDNLLVSKVDIIPPLASCFAFLSHNISSAQPEELAALGGACAALLPISGGRSHEFRPDGIAEDASNHYARELVRFIDARIADAELCPSMAADNLGIS