ggKbase home page

ACD2_22

Alias: ACD2_1308.61489.60

Search features with annotation key words

Displaying items 31-51 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD2_22_31
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(39241..39570)
DNA (330bp) protein (110aa)
seg (db=Seg db_id=seg from=87 to=100)
seg 87..100 Tax=ACD2
ACD2_22_32
ACD2, Gracilibacteria, Bacteria

Not on your lists

40436..40732
DNA (297bp) protein (99aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions 7..29 Tax=ACD2
ACD2_22_33
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(40669..40788)
DNA (120bp) protein (40aa)
40669..40788 - (rbs_motif=TAA rbs_spacer=7bp)
hypothetical protein Tax=ACD2
ACD2_22_34
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(40796..43129)
DNA (2334bp) protein (778aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
GTP pyrophosphokinase n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3A9Z8_CARHZ (db=UNIREF evalue=7.0e-122 bit_score=442.0 identity=37.8 coverage=87.2750642673522)
ACD2_22_35

Not on your lists

comp(43880..44878)
DNA (999bp) protein (333aa)
prepilin peptidase (EC:3.4.23.43)
seg (db=Seg db_id=seg from=4 to=21)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=300 to=322)
ACD2_22_36
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(44880..45461)
DNA (582bp) protein (194aa)
44880..45461 - (rbs_motif=TAA rbs_spacer=10bp)
hypothetical protein Tax=ACD2
ACD2_22_37
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(45461..47368)
DNA (1908bp) protein (636aa)
coiled-coil (db=Coil db_id=coil from=67 to=88 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=252 to=274)
seg (db=Seg db_id=seg from=44 to=62)
coiled-coil 67..88 Tax=ACD2
ACD2_22_38

Not on your lists

comp(47460..47840)
DNA (381bp) protein (127aa)
hypothetical protein
coiled-coil (db=Coil db_id=coil from=54 to=86 evalue=NA)
seg (db=Seg db_id=seg from=105 to=118)
tetratricopeptide TPR_3 alias=ACD2_C00022G00038,ACD2_1308.61489.60G0038,ACD2_1308.61489.60_38 id=34763 tax=ACD2 species=Chlorobium phaeobacteroides genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi organism_group=BD1-5 organism_desc=BD1-5
ACD2_22_39
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(47950..48711)
DNA (762bp) protein (254aa)
Map
seg (db=Seg db_id=seg from=14 to=27)
met_pdase_I: methionine aminopeptidase, t (db=HMMTigr db_id=TIGR00500 from=6 to=253 evalue=1.8e-88 interpro_id=IPR002467 interpro_description=Peptidase M24A, methionine aminopeptidase, subfamily 1 GO=Molecular Function: aminopeptidase activity (GO:0004177), Biological Process: proteolysis (GO:0006508), Molecular Function: metalloexopeptidase activity (GO:0008235))
no description (db=Gene3D db_id=G3DSA:3.90.230.10 from=5 to=251 evalue=1.6e-68 interpro_id=IPR000994 interpro_description=Peptidase M24, structural domain GO=Biological Process: cellular process (GO:0009987))
ACD2_22_40
ACD2, Gracilibacteria, Bacteria

Not on your lists

48777..49340
DNA (564bp) protein (188aa)
48777..49340 + (rbs_motif=TAAAAA rbs_spacer=15bp)
hypothetical protein Tax=ACD2
ACD2_22_41
ACD2, Gracilibacteria, Bacteria

Not on your lists

49405..51648
DNA (2244bp) protein (748aa)
seg (db=Seg db_id=seg from=407 to=417)
seg (db=Seg db_id=seg from=174 to=187)
transmembrane_regions (db=TMHMM db_id=tmhmm from=171 to=189)
transmembrane_regions 171..189 Tax=ACD2
ACD2_22_42
unknown

Not on your lists

51708..53558
DNA (1851bp) protein (617aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HNY3_9FIRM (db=UNIREF evalue=4.0e-14 bit_score=83.6 identity=28.51 coverage=33.22528363047)
RND family efflux transporter MFP subunit
seg (db=Seg db_id=seg from=167 to=183)
seg (db=Seg db_id=seg from=99 to=116)
ACD2_22_43
ACD2, Gracilibacteria, Bacteria

Not on your lists

53568..54107
DNA (540bp) protein (180aa)
53568..54107 + (rbs_motif=TAA rbs_spacer=9bp)
hypothetical protein Tax=ACD2
ACD2_22_44
ACD2, Gracilibacteria, Bacteria

Not on your lists

54120..55307
DNA (1188bp) protein (396aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
transmembrane_regions (db=TMHMM db_id=tmhmm from=323 to=345)
transmembrane_regions (db=TMHMM db_id=tmhmm from=360 to=382)
ACD2_22_45
ACD2, Gracilibacteria, Bacteria

Not on your lists

55323..55703
DNA (381bp) protein (127aa)
55323..55703 + (rbs_motif=TAA rbs_spacer=11bp)
hypothetical protein Tax=ACD2
ACD2_22_46
ACD2, Gracilibacteria, Bacteria

Not on your lists

55714..56043
DNA (330bp) protein (110aa)
55714..56043 + (rbs_motif=TAA rbs_spacer=10bp)
hypothetical protein Tax=ACD2
ACD2_22_47
ACD2, Gracilibacteria, Bacteria

Not on your lists

56049..57089
DNA (1041bp) protein (347aa)
seg (db=Seg db_id=seg from=144 to=159)
coiled-coil (db=Coil db_id=coil from=139 to=164 evalue=NA)
coiled-coil 139..164 Tax=ACD2
ACD2_22_48
ACD2, Gracilibacteria, Bacteria

Not on your lists

57100..57810
DNA (711bp) protein (237aa)
macrolide ABC transporter ATP-binding protein
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=149 to=163 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
ABC TRANSPORTER (db=HMMPanther db_id=PTHR19222:SF32 from=7 to=222 evalue=1.5e-90)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=7 to=222 evalue=1.5e-90)
ACD2_22_49
ACD2, Gracilibacteria, Bacteria

Not on your lists

57798..59420
DNA (1623bp) protein (541aa)
seg (db=Seg db_id=seg from=316 to=329)
seg 316..329 Tax=ACD2
ACD2_22_50
ACD2, Gracilibacteria, Bacteria

Not on your lists

59421..60812
DNA (1392bp) protein (464aa)
59421..60812 + (rbs_motif=TAAA rbs_spacer=9bp)
hypothetical protein Tax=ACD2
ACD2_22_51
ACD2, Gracilibacteria, Bacteria

Not on your lists

61246..61551
DNA (306bp) protein (102aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=79 to=101)
transmembrane_regions 79..101 Tax=ACD2
Displaying items 31-51 of 51 in total

View Taxonomy