ggKbase home page

ACD2_8_34 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
Ku protein similarity KEGG
DB: KEGG
46.1 258.0 247 5.60e-63 geb:GM18_0120
seg (db=Seg db_id=seg from=128 to=143) iprscan interpro
DB: Seg
null null null null geb:GM18_0120
Ku_bact: Ku protein (db=HMMTigr db_id=TIGR02772 from=1 to=255 evalue=1.4e-84 interpro_id=IPR009187 interpro_description=Predicted Ku, prokaryotic type) iprscan interpro
DB: HMMTigr
null null null 1.40e-84 geb:GM18_0120
Predicted Ku DNA-binding protein, prokaryotic type (db=HMMPIR db_id=PIRSF006493 from=1 to=259 evalue=3.5e-67 interpro_id=IPR009187 interpro_description=Predicted Ku, prokaryotic type) iprscan interpro
DB: HMMPIR
null null null 3.50e-67 geb:GM18_0120
SPOC domain-like (db=superfamily db_id=SSF100939 from=1 to=259 evalue=1.7e-39 interpro_id=IPR016194 interpro_description=Spen Paralogue and Orthologue SPOC, C-terminal-like GO=Molecular Function: binding (GO:0005488)) iprscan interpro
DB: superfamily
null null null 1.70e-39 geb:GM18_0120
Ku (db=HMMPfam db_id=PF02735 from=13 to=186 evalue=2.3e-21 interpro_id=IPR006164 interpro_description=DNA helicase, ATP-dependent, Ku type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: ATP-dependent DNA helicase activity (GO:0004003), Biological Process: double-strand break repair via nonhomologous end joining (GO:0006303)) iprscan interpro
DB: HMMPfam
null null null 2.30e-21 geb:GM18_0120
no description (db=HMMSmart db_id=SM00559 from=52 to=180 evalue=2.7e-14 interpro_id=IPR006164 interpro_description=DNA helicase, ATP-dependent, Ku type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: ATP-dependent DNA helicase activity (GO:0004003), Biological Process: double-strand break repair via nonhomologous end joining (GO:0006303)) iprscan interpro
DB: HMMSmart
null null null 2.70e-14 geb:GM18_0120
Prokaryotic_Ku (db=HAMAP db_id=MF_01875 from=1 to=254 evalue=29.076) iprscan interpro
DB: HAMAP
null null null 2.91e+01 geb:GM18_0120
Ku protein; K10979 DNA end-binding protein Ku alias=ACD2_1051.112881.59G0034,ACD2_1051.112881.59_34,ACD2_C00008G00034 id=34198 tax=ACD2 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=BD1-5 organism_desc=BD1-5 similarity UNIREF
DB: UNIREF90
100.0 null 535 6.80e-150 geb:GM18_0120
Ku protein; K10979 DNA end-binding protein Ku Tax=ACD2 UNIPROT
DB: UniProtKB
98.5 259.0 478 5.70e-132 ggdbv1_34198