Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
Ku protein | similarity |
KEGG
DB: KEGG |
46.1 | 258.0 | 247 | 5.60e-63 | geb:GM18_0120 |
seg (db=Seg db_id=seg from=128 to=143) | iprscan |
interpro
DB: Seg |
null | null | null | null | geb:GM18_0120 |
Ku_bact: Ku protein (db=HMMTigr db_id=TIGR02772 from=1 to=255 evalue=1.4e-84 interpro_id=IPR009187 interpro_description=Predicted Ku, prokaryotic type) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 1.40e-84 | geb:GM18_0120 |
Predicted Ku DNA-binding protein, prokaryotic type (db=HMMPIR db_id=PIRSF006493 from=1 to=259 evalue=3.5e-67 interpro_id=IPR009187 interpro_description=Predicted Ku, prokaryotic type) | iprscan |
interpro
DB: HMMPIR |
null | null | null | 3.50e-67 | geb:GM18_0120 |
SPOC domain-like (db=superfamily db_id=SSF100939 from=1 to=259 evalue=1.7e-39 interpro_id=IPR016194 interpro_description=Spen Paralogue and Orthologue SPOC, C-terminal-like GO=Molecular Function: binding (GO:0005488)) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.70e-39 | geb:GM18_0120 |
Ku (db=HMMPfam db_id=PF02735 from=13 to=186 evalue=2.3e-21 interpro_id=IPR006164 interpro_description=DNA helicase, ATP-dependent, Ku type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: ATP-dependent DNA helicase activity (GO:0004003), Biological Process: double-strand break repair via nonhomologous end joining (GO:0006303)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 2.30e-21 | geb:GM18_0120 |
no description (db=HMMSmart db_id=SM00559 from=52 to=180 evalue=2.7e-14 interpro_id=IPR006164 interpro_description=DNA helicase, ATP-dependent, Ku type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: ATP-dependent DNA helicase activity (GO:0004003), Biological Process: double-strand break repair via nonhomologous end joining (GO:0006303)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 2.70e-14 | geb:GM18_0120 |
Prokaryotic_Ku (db=HAMAP db_id=MF_01875 from=1 to=254 evalue=29.076) | iprscan |
interpro
DB: HAMAP |
null | null | null | 2.91e+01 | geb:GM18_0120 |
Ku protein; K10979 DNA end-binding protein Ku alias=ACD2_1051.112881.59G0034,ACD2_1051.112881.59_34,ACD2_C00008G00034 id=34198 tax=ACD2 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=BD1-5 organism_desc=BD1-5 | similarity |
UNIREF
DB: UNIREF90 |
100.0 | null | 535 | 6.80e-150 | geb:GM18_0120 |
Ku protein; K10979 DNA end-binding protein Ku Tax=ACD2 |
UNIPROT
DB: UniProtKB |
98.5 | 259.0 | 478 | 5.70e-132 | ggdbv1_34198 |