ggKbase home page

ACD2_8_33 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
DNA ligase D n=1 Tax=Geobacter sp. FRC-32 RepID=B9LYX5_GEOSF (db=UNIREF evalue=0.0 bit_score=678.0 identity=42.46 coverage=99.1576413959085) similarity UNIREF
DB: UNIREF
42.46 99.16 678 0.0 pcu:pc1833
hypothetical protein rbh KEGG
DB: KEGG
43.4 815.0 656 9.80e-186 pcu:pc1833
hypothetical protein similarity KEGG
DB: KEGG
43.4 815.0 656 9.80e-186 pcu:pc1833
hypothetical protein rbh KEGG
DB: KEGG
43.4 815.0 656 9.80e-186 pcu:pc1833
seg (db=Seg db_id=seg from=552 to=567) iprscan interpro
DB: Seg
null null null null pcu:pc1833
seg (db=Seg db_id=seg from=201 to=211) iprscan interpro
DB: Seg
null null null null pcu:pc1833
NHEJ_ligase_prk: DNA ligase D (db=HMMTigr db_id=TIGR02776 from=227 to=811 evalue=7.5e-107 interpro_id=IPR014143 interpro_description=DNA ligase D) iprscan interpro
DB: HMMTigr
null null null 7.50e-107 pcu:pc1833
LigD_PE_dom: DNA ligase D, 3'-phospho (db=HMMTigr db_id=TIGR02777 from=2 to=165 evalue=2.0e-53 interpro_id=IPR014144 interpro_description=DNA ligase D, 3'-phosphoesterase domain) iprscan interpro
DB: HMMTigr
null null null 2.00e-53 pcu:pc1833
DNA ligase/mRNA capping enzyme, catalytic domain (db=superfamily db_id=SSF56091 from=213 to=397 evalue=4.1e-36) iprscan interpro
DB: superfamily
null null null 4.10e-36 pcu:pc1833
DNA_ligase_A_M (db=HMMPfam db_id=PF01068 from=219 to=397 evalue=9.8e-23 interpro_id=IPR012310 interpro_description=ATP dependent DNA ligase, central GO=Molecular Function: DNA ligase (ATP) activity (GO:0003910), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA replication (GO:0006260), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310)) iprscan interpro
DB: HMMPfam
null null null 9.80e-23 pcu:pc1833
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=398 to=505 evalue=3.1e-22 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) iprscan interpro
DB: superfamily
null null null 3.10e-22 pcu:pc1833
DNA_ligase_A_C (db=HMMPfam db_id=PF04679 from=417 to=508 evalue=8.6e-18 interpro_id=IPR012309 interpro_description=ATP dependent DNA ligase, C-terminal GO=Molecular Function: DNA ligase (ATP) activity (GO:0003910), Biological Process: DNA replication (GO:0006260), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310)) iprscan interpro
DB: HMMPfam
null null null 8.60e-18 pcu:pc1833
ATP-DEPENDENT DNA LIGASE FAMILY (db=HMMPanther db_id=PTHR10459 from=151 to=515 evalue=3.8e-16) iprscan interpro
DB: HMMPanther
null null null 3.80e-16 pcu:pc1833
no description (db=Gene3D db_id=G3DSA:3.30.470.30 from=242 to=354 evalue=1.2e-13) iprscan interpro
DB: Gene3D
null null null 1.20e-13 pcu:pc1833
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=400 to=522 evalue=3.4e-09 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) iprscan interpro
DB: Gene3D
null null null 3.40e-09 pcu:pc1833
DNA_LIGASE_A3 (db=ProfileScan db_id=PS50160 from=306 to=397 evalue=10.739 interpro_id=IPR012310 interpro_description=ATP dependent DNA ligase, central GO=Molecular Function: DNA ligase (ATP) activity (GO:0003910), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA replication (GO:0006260), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310)) iprscan interpro
DB: ProfileScan
null null null 1.07e+01 pcu:pc1833
geo:Geob_0336 DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1] alias=ACD2_1051.112881.59G0033,ACD2_1051.112881.59_33,ACD2_C00008G00033 id=34206 tax=ACD2 species=Geobacter sp. FRC-32 genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=BD1-5 organism_desc=BD1-5 similarity UNIREF
DB: UNIREF90
100.0 null 1782 0.0 pcu:pc1833
geo:Geob_0336 DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=ACD2 UNIPROT
DB: UniProtKB
98.1 831.0 1500 0.0 ggdbv1_34206