Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
DNA ligase D n=1 Tax=Geobacter sp. FRC-32 RepID=B9LYX5_GEOSF (db=UNIREF evalue=0.0 bit_score=678.0 identity=42.46 coverage=99.1576413959085) | similarity |
UNIREF
DB: UNIREF |
42.46 | 99.16 | 678 | 0.0 | pcu:pc1833 |
hypothetical protein | rbh |
KEGG
DB: KEGG |
43.4 | 815.0 | 656 | 9.80e-186 | pcu:pc1833 |
hypothetical protein | similarity |
KEGG
DB: KEGG |
43.4 | 815.0 | 656 | 9.80e-186 | pcu:pc1833 |
hypothetical protein | rbh |
KEGG
DB: KEGG |
43.4 | 815.0 | 656 | 9.80e-186 | pcu:pc1833 |
seg (db=Seg db_id=seg from=552 to=567) | iprscan |
interpro
DB: Seg |
null | null | null | null | pcu:pc1833 |
seg (db=Seg db_id=seg from=201 to=211) | iprscan |
interpro
DB: Seg |
null | null | null | null | pcu:pc1833 |
NHEJ_ligase_prk: DNA ligase D (db=HMMTigr db_id=TIGR02776 from=227 to=811 evalue=7.5e-107 interpro_id=IPR014143 interpro_description=DNA ligase D) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 7.50e-107 | pcu:pc1833 |
LigD_PE_dom: DNA ligase D, 3'-phospho (db=HMMTigr db_id=TIGR02777 from=2 to=165 evalue=2.0e-53 interpro_id=IPR014144 interpro_description=DNA ligase D, 3'-phosphoesterase domain) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 2.00e-53 | pcu:pc1833 |
DNA ligase/mRNA capping enzyme, catalytic domain (db=superfamily db_id=SSF56091 from=213 to=397 evalue=4.1e-36) | iprscan |
interpro
DB: superfamily |
null | null | null | 4.10e-36 | pcu:pc1833 |
DNA_ligase_A_M (db=HMMPfam db_id=PF01068 from=219 to=397 evalue=9.8e-23 interpro_id=IPR012310 interpro_description=ATP dependent DNA ligase, central GO=Molecular Function: DNA ligase (ATP) activity (GO:0003910), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA replication (GO:0006260), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 9.80e-23 | pcu:pc1833 |
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=398 to=505 evalue=3.1e-22 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 3.10e-22 | pcu:pc1833 |
DNA_ligase_A_C (db=HMMPfam db_id=PF04679 from=417 to=508 evalue=8.6e-18 interpro_id=IPR012309 interpro_description=ATP dependent DNA ligase, C-terminal GO=Molecular Function: DNA ligase (ATP) activity (GO:0003910), Biological Process: DNA replication (GO:0006260), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 8.60e-18 | pcu:pc1833 |
ATP-DEPENDENT DNA LIGASE FAMILY (db=HMMPanther db_id=PTHR10459 from=151 to=515 evalue=3.8e-16) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 3.80e-16 | pcu:pc1833 |
no description (db=Gene3D db_id=G3DSA:3.30.470.30 from=242 to=354 evalue=1.2e-13) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.20e-13 | pcu:pc1833 |
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=400 to=522 evalue=3.4e-09 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) | iprscan |
interpro
DB: Gene3D |
null | null | null | 3.40e-09 | pcu:pc1833 |
DNA_LIGASE_A3 (db=ProfileScan db_id=PS50160 from=306 to=397 evalue=10.739 interpro_id=IPR012310 interpro_description=ATP dependent DNA ligase, central GO=Molecular Function: DNA ligase (ATP) activity (GO:0003910), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA replication (GO:0006260), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.07e+01 | pcu:pc1833 |
geo:Geob_0336 DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1] alias=ACD2_1051.112881.59G0033,ACD2_1051.112881.59_33,ACD2_C00008G00033 id=34206 tax=ACD2 species=Geobacter sp. FRC-32 genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=BD1-5 organism_desc=BD1-5 | similarity |
UNIREF
DB: UNIREF90 |
100.0 | null | 1782 | 0.0 | pcu:pc1833 |
geo:Geob_0336 DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=ACD2 |
UNIPROT
DB: UniProtKB |
98.1 | 831.0 | 1500 | 0.0 | ggdbv1_34206 |