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ACD2_8_5 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
50S ribosomal protein L1 similarity KEGG
DB: KEGG
48.9 225.0 228 2.40e-57 med:MELS_0402
rplA_bact: ribosomal protein L1 (db=HMMTigr db_id=TIGR01169 from=3 to=227 evalue=1.5e-103 interpro_id=IPR005878 interpro_description=Ribosomal protein L1, bacterial-type GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934)) iprscan interpro
DB: HMMTigr
null null null 1.50e-103 med:MELS_0402
Ribosomal protein, L1p/L1a/L10e/organellar L1 types (db=HMMPIR db_id=PIRSF002155 from=1 to=227 evalue=1.5e-85 interpro_id=IPR002143 interpro_description=Ribosomal protein L1 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) iprscan interpro
DB: HMMPIR
null null null 1.50e-85 med:MELS_0402
RIBOSOMAL PROTEIN L7AE FAMILY MEMBER (db=HMMPanther db_id=PTHR23105 from=21 to=225 evalue=4.4e-76) iprscan interpro
DB: HMMPanther
null null null 4.40e-76 med:MELS_0402
50S RIBOSOMAL PROTEIN L1P (db=HMMPanther db_id=PTHR23105:SF5 from=21 to=225 evalue=4.4e-76) iprscan interpro
DB: HMMPanther
null null null 4.40e-76 med:MELS_0402
Ribosomal_L1 (db=HMMPfam db_id=PF00687 from=15 to=221 evalue=1.2e-68 interpro_id=IPR002143 interpro_description=Ribosomal protein L1 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) iprscan interpro
DB: HMMPfam
null null null 1.20e-68 med:MELS_0402
Ribosomal protein L1 (db=superfamily db_id=SSF56808 from=6 to=227 evalue=2.5e-66 interpro_id=IPR002143 interpro_description=Ribosomal protein L1 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) iprscan interpro
DB: superfamily
null null null 2.50e-66 med:MELS_0402
no description (db=Gene3D db_id=G3DSA:3.30.190.20 from=2 to=226 evalue=2.7e-42 interpro_id=IPR016094 interpro_description=Ribosomal protein L1, 2-layer alpha/beta-sandwich GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: Gene3D
null null null 2.70e-42 med:MELS_0402
rplA; ribosomal protein L1; K02863 large subunit ribosomal protein L1 alias=ACD2_1051.112881.59G0005,ACD2_1051.112881.59_5,ACD2_C00008G00005 id=34219 tax=ACD2 species=Rhodospirillum centenum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria organism_group=BD1-5 organism_desc=BD1-5 similarity UNIREF
DB: UNIREF90
100.0 null 447 2.10e-123 med:MELS_0402
rplA; ribosomal protein L1; K02863 large subunit ribosomal protein L1 Tax=ACD2 UNIPROT
DB: UniProtKB
99.6 227.0 440 2.00e-120 ggdbv1_34219
  • SCG Annotations
  • BSCG ribosomal protein L1