Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
rluC1; ribosomal large subunit pseudouridine synthase C (EC:5.4.99.24) | similarity |
KEGG
DB: KEGG |
35.6 | 303.0 | 167 | 5.30e-39 | cad:Curi_c10690 |
Pseudouridine synthase n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PEP1_9SPHN (db=UNIREF evalue=2.0e-35 bit_score=153.0 identity=34.14 coverage=74.6875) | similarity |
UNIREF
DB: UNIREF |
34.14 | 74.69 | 153 | 2.00e-35 | cad:Curi_c10690 |
seg (db=Seg db_id=seg from=17 to=30) | iprscan |
interpro
DB: Seg |
null | null | null | null | cad:Curi_c10690 |
seg (db=Seg db_id=seg from=33 to=46) | iprscan |
interpro
DB: Seg |
null | null | null | null | cad:Curi_c10690 |
rluA_subfam: pseudouridine synthase, RluA (db=HMMTigr db_id=TIGR00005 from=8 to=319 evalue=3.7e-49 interpro_id=IPR006225 interpro_description=Pseudouridine synthase, RluC/RluD GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 3.70e-49 | cad:Curi_c10690 |
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=80 to=319 evalue=4.2e-46 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: superfamily |
null | null | null | 4.20e-46 | cad:Curi_c10690 |
RIBOSOMAL PSEUDOURIDINE SYNTHASE (db=HMMPanther db_id=PTHR10436 from=3 to=313 evalue=2.8e-45) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 2.80e-45 | cad:Curi_c10690 |
PseudoU_synth_2 (db=HMMPfam db_id=PF00849 from=99 to=256 evalue=2.0e-23 interpro_id=IPR006145 interpro_description=Pseudouridine synthase, RsuA and RluB/C/D/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 2.00e-23 | cad:Curi_c10690 |
Alpha-L RNA-binding motif (db=superfamily db_id=SSF55174 from=12 to=69 evalue=7.2e-07) | iprscan |
interpro
DB: superfamily |
null | null | null | 7.20e-07 | cad:Curi_c10690 |
S4 (db=HMMPfam db_id=PF01479 from=13 to=59 evalue=3.0e-06 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 3.00e-06 | cad:Curi_c10690 |
no description (db=HMMSmart db_id=SM00363 from=13 to=77 evalue=0.0004 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 4.00e-04 | cad:Curi_c10690 |
S4 (db=ProfileScan db_id=PS50889 from=13 to=73 evalue=11.129 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.11e+01 | cad:Curi_c10690 |
Pseudouridine synthase n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PEP1_9SPHN Tax=ACD2 |
UNIPROT
DB: UniProtKB |
98.1 | 319.0 | 573 | 1.60e-160 | ggdbv1_34457 |