Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
seg (db=Seg db_id=seg from=62 to=73) | iprscan |
interpro
DB: Seg |
null | null | null | null | srb:P148_SR1C001G0753 |
SIGMA70_2 (db=PatternScan db_id=PS00716 from=39 to=65 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: PatternScan |
null | null | null | 0.0 | srb:P148_SR1C001G0753 |
Sigma70_r4 (db=HMMPfam db_id=PF04545 from=16 to=59 evalue=1.2e-11 interpro_id=IPR007630 interpro_description=RNA polymerase sigma-70 region 4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.20e-11 | srb:P148_SR1C001G0753 |
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=1 to=86 evalue=8.1e-11 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) | iprscan |
interpro
DB: Gene3D |
null | null | null | 8.10e-11 | srb:P148_SR1C001G0753 |
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=1 to=71 evalue=1.3e-10 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.30e-10 | srb:P148_SR1C001G0753 |
SIGMA70FCT (db=FPrintScan db_id=PR00046 from=54 to=65 evalue=1.6e-09 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 1.60e-09 | srb:P148_SR1C001G0753 |
SIGMA70FCT (db=FPrintScan db_id=PR00046 from=39 to=54 evalue=1.6e-09 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 1.60e-09 | srb:P148_SR1C001G0753 |
SIGMA70FCT (db=FPrintScan db_id=PR00046 from=19 to=31 evalue=1.6e-09 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 1.60e-09 | srb:P148_SR1C001G0753 |
seg 62..73 Tax=ACD2 |
UNIPROT
DB: UniProtKB |
98.9 | 351.0 | 651 | 8.70e-184 | ggdbv1_34462 | |
hypothetical protein |
KEGG
DB: KEGG |
33.7 | 335.0 | 176 | 1.70e-41 | srb:P148_SR1C001G0753 |