ggKbase home page

ACD2_24_11 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
Tex protein-related transcription accessory protein with S1 RNA binding domain similarity KEGG
DB: KEGG
38.5 737.0 422 2.60e-115 aoc:Aocu_00550
Tex protein-related transcription accessory protein with S1 RNA binding domain rbh KEGG
DB: KEGG
38.5 737.0 422 2.60e-115 aoc:Aocu_00550
Tex protein-related transcription accessory protein with S1 RNA binding domain rbh KEGG
DB: KEGG
38.5 737.0 422 2.60e-115 aoc:Aocu_00550
RNA binding S1 domain protein n=1 Tax=bacterium S5 RepID=D3BWV8_9BACT (db=UNIREF evalue=7.0e-99 bit_score=365.0 identity=35.3 coverage=97.5714285714286) similarity UNIREF
DB: UNIREF
35.3 97.57 365 7.00e-99 aoc:Aocu_00550
seg (db=Seg db_id=seg from=154 to=169) iprscan interpro
DB: Seg
null null null null aoc:Aocu_00550
seg (db=Seg db_id=seg from=244 to=260) iprscan interpro
DB: Seg
null null null null aoc:Aocu_00550
coiled-coil (db=Coil db_id=coil from=66 to=87 evalue=NA) iprscan interpro
DB: Coil
null null null null aoc:Aocu_00550
seg (db=Seg db_id=seg from=112 to=121) iprscan interpro
DB: Seg
null null null null aoc:Aocu_00550
seg (db=Seg db_id=seg from=409 to=420) iprscan interpro
DB: Seg
null null null null aoc:Aocu_00550
TEX PROTEIN-RELATEDTRANSCRIPTION ACCESSORY PROTEIN (S1 RNA BINDING DOMAIN) (db=HMMPanther db_id=PTHR10724 from=8 to=699 evalue=3.5e-155) iprscan interpro null null null 3.50e-155 aoc:Aocu_00550
Tex_N (db=HMMPfam db_id=PF09371 from=17 to=198 evalue=1.2e-43 interpro_id=IPR018974 interpro_description=Tex-like protein, N-terminal) iprscan interpro
DB: HMMPfam
null null null 1.21e-43 aoc:Aocu_00550
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=614 to=698 evalue=2.3e-18 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) iprscan interpro
DB: superfamily
null null null 2.30e-18 aoc:Aocu_00550
S1 (db=HMMPfam db_id=PF00575 from=626 to=697 evalue=7.3e-16 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMPfam
null null null 7.30e-16 aoc:Aocu_00550
no description (db=HMMSmart db_id=SM00316 from=626 to=697 evalue=1.3e-15) iprscan interpro
DB: HMMSmart
null null null 1.30e-15 aoc:Aocu_00550
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=623 to=697 evalue=1.3e-15 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) iprscan interpro
DB: Gene3D
null null null 1.30e-15 aoc:Aocu_00550
no description (db=HMMSmart db_id=SM00732 from=326 to=415 evalue=4.3e-11 interpro_id=IPR006641 interpro_description=Resolvase, RNase H-like fold GO=Biological Process: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process (GO:0006139), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788)) iprscan interpro
DB: HMMSmart
null null null 4.30e-11 aoc:Aocu_00550
S1 (db=ProfileScan db_id=PS50126 from=628 to=697 evalue=18.019 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: ProfileScan
null null null 1.80e+01 aoc:Aocu_00550
ele:Elen_1469 RNA binding S1 domain protein; K06959 alias=ACD2_C00024G00011,ACD2_2507.52297.57G0011,ACD2_2507.52297.57_11 id=34879 tax=ACD2 species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes organism_group=BD1-5 organism_desc=BD1-5 similarity UNIREF
DB: UNIREF90
100.0 null 1417 0.0 aoc:Aocu_00550
ele:Elen_1469 RNA binding S1 domain protein; K06959 Tax=ACD2 UNIPROT
DB: UniProtKB
98.3 700.0 1244 0.0 ggdbv1_34879