Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
pseudouridine synthase | similarity |
KEGG
DB: KEGG |
46.3 | 229.0 | 203 | 6.60e-50 | dal:Dalk_1419 |
RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B (db=HMMPanther db_id=PTHR21600 from=11 to=233 evalue=3.1e-52) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 3.10e-52 | dal:Dalk_1419 |
RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B (db=HMMPanther db_id=PTHR21600:SF2 from=11 to=233 evalue=3.1e-52) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 3.10e-52 | dal:Dalk_1419 |
TIGR00093: pseudouridine synthase (db=HMMTigr db_id=TIGR00093 from=72 to=225 evalue=2.3e-30 interpro_id=IPR000748 interpro_description=Pseudouridine synthase, RsuA/RluB/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: intramolecular transferase activity (GO:0016866)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 2.30e-30 | dal:Dalk_1419 |
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=64 to=235 evalue=3.9e-28 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: superfamily |
null | null | null | 3.90e-28 | dal:Dalk_1419 |
Alpha-L RNA-binding motif (db=superfamily db_id=SSF55174 from=7 to=73 evalue=4.2e-09) | iprscan |
interpro
DB: superfamily |
null | null | null | 4.20e-09 | dal:Dalk_1419 |
S4 (db=HMMPfam db_id=PF01479 from=8 to=41 evalue=1.1e-07 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.10e-07 | dal:Dalk_1419 |
PseudoU_synth_2 (db=HMMPfam db_id=PF00849 from=87 to=141 evalue=6.6e-06 interpro_id=IPR006145 interpro_description=Pseudouridine synthase, RsuA and RluB/C/D/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 6.60e-06 | dal:Dalk_1419 |
no description (db=HMMSmart db_id=SM00363 from=7 to=65 evalue=3.0e-05 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 3.00e-05 | dal:Dalk_1419 |
S4 (db=ProfileScan db_id=PS50889 from=7 to=72 evalue=11.173 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.12e+01 | dal:Dalk_1419 |
pseudouridine synthase; K06178 ribosomal large subunit pseudouridine synthase B [EC:5.4.99.12] alias=ACD2_3189.48949.73G0035,ACD2_3189.48949.73_35,ACD2_C00031G00035 id=35061 tax=ACD2 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=BD1-5 organism_desc=BD1-5 | similarity |
UNIREF
DB: UNIREF90 |
100.0 | null | 498 | 8.60e-139 | dal:Dalk_1419 |
Uncharacterized protein {ECO:0000313|EMBL:EKE29134.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;" |
UNIPROT
DB: UniProtKB |
94.1 | 239.0 | 420 | 1.30e-114 | K2GFR7_9BACT |