Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
UPI0001D5B34C related cluster n=1 Tax=unknown RepID=UPI0001D5B34C (db=UNIREF evalue=0.0 bit_score=1050.0 identity=47.72 coverage=90.5485232067511) | similarity |
UNIREF
DB: UNIREF |
47.72 | 90.55 | 1050 | 0.0 | tro:trd_0991 |
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) | rbh |
KEGG
DB: KEGG |
47.0 | 999.99 | 987 | 4.50e-285 | tro:trd_0991 |
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) | rbh |
KEGG
DB: KEGG |
47.0 | 999.99 | 987 | 4.50e-285 | tro:trd_0991 |
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) | similarity |
KEGG
DB: KEGG |
47.0 | 999.99 | 987 | 4.50e-285 | tro:trd_0991 |
seg (db=Seg db_id=seg from=318 to=331) | iprscan |
interpro
DB: Seg |
null | null | null | null | tro:trd_0991 |
seg (db=Seg db_id=seg from=667 to=680) | iprscan |
interpro
DB: Seg |
null | null | null | null | tro:trd_0991 |
coiled-coil (db=Coil db_id=coil from=1132 to=1153 evalue=NA) | iprscan |
interpro
DB: Coil |
null | null | null | null | tro:trd_0991 |
rpoB: DNA-directed RNA polymerase, beta subu (db=HMMTigr db_id=TIGR02013 from=30 to=1129 evalue=0.0 interpro_id=IPR010243 interpro_description=DNA-directed RNA polymerase, beta subunit, bacterial-type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 0.0 | tro:trd_0991 |
DNA-DIRECTED RNA POLYMERASE BETA CHAIN (db=HMMPanther db_id=PTHR20856:SF3 from=387 to=1154 evalue=0.0) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 0.0 | tro:trd_0991 |
DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2 (db=HMMPanther db_id=PTHR20856 from=387 to=1154 evalue=0.0 interpro_id=IPR015712 interpro_description=DNA-directed RNA polymerase, subunit 2 GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: ribonucleoside binding (GO:0032549)) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 0.0 | tro:trd_0991 |
beta and beta-prime subunits of DNA dependent RNA-polymerase (db=superfamily db_id=SSF64484 from=32 to=1133 evalue=0.0) | iprscan |
interpro
DB: superfamily |
null | null | null | 0.0 | tro:trd_0991 |
RNA_pol_Rpb2_6 (db=HMMPfam db_id=PF00562 from=617 to=1054 evalue=1.8e-128 interpro_id=IPR007120 interpro_description=DNA-directed RNA polymerase, subunit 2, domain 6 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.80e-128 | tro:trd_0991 |
no description (db=Gene3D db_id=G3DSA:3.90.1100.10 from=32 to=665 evalue=6.9e-110) | iprscan |
interpro
DB: Gene3D |
null | null | null | 6.90e-110 | tro:trd_0991 |
no description (db=Gene3D db_id=G3DSA:2.40.270.10 from=733 to=1040 evalue=5.4e-61) | iprscan |
interpro
DB: Gene3D |
null | null | null | 5.40e-61 | tro:trd_0991 |
RNA_pol_Rpb2_1 (db=HMMPfam db_id=PF04563 from=48 to=407 evalue=9.7e-27 interpro_id=IPR007644 interpro_description=RNA polymerase, beta subunit, protrusion GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 9.70e-27 | tro:trd_0991 |
RNA_pol_Rpb2_3 (db=HMMPfam db_id=PF04565 from=411 to=479 evalue=2.5e-24 interpro_id=IPR007645 interpro_description=RNA polymerase Rpb2, domain 3 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 2.50e-24 | tro:trd_0991 |
RNA_pol_Rpb2_7 (db=HMMPfam db_id=PF04560 from=1057 to=1130 evalue=1.7e-23 interpro_id=IPR007641 interpro_description=RNA polymerase Rpb2, domain 7 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.70e-23 | tro:trd_0991 |
RNA_pol_Rpb2_2 (db=HMMPfam db_id=PF04561 from=181 to=352 evalue=1.7e-21 interpro_id=IPR007642 interpro_description=RNA polymerase Rpb2, domain 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.70e-21 | tro:trd_0991 |
no description (db=Gene3D db_id=G3DSA:2.40.50.100 from=666 to=730 evalue=1.6e-12) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.60e-12 | tro:trd_0991 |
RNA_pol_Rpb2_45 (db=HMMPfam db_id=PF10385 from=550 to=607 evalue=5.6e-06 interpro_id=IPR019462 interpro_description=DNA-directed RNA polymerase, beta subunit, external 1 domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 5.60e-06 | tro:trd_0991 |
RNApol_bact_RpoB (db=HAMAP db_id=MF_01321 from=34 to=1132 evalue=10.884 interpro_id=IPR010243 interpro_description=DNA-directed RNA polymerase, beta subunit, bacterial-type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HAMAP |
null | null | null | 1.09e+01 | tro:trd_0991 |
slp:Slip_2245 DNA-directed RNA polymerase, beta subunit; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] alias=ACD2_C00040G00005,ACD2_1456.17442.57G0005,ACD2_1456.17442.57_5 id=35272 tax=ACD2 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=BD1-5 organism_desc=BD1-5 | similarity |
UNIREF
DB: UNIREF90 |
100.0 | null | 2421 | 0.0 | tro:trd_0991 |
slp:Slip_2245 DNA-directed RNA polymerase, beta subunit; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=ACD2 |
UNIPROT
DB: UniProtKB |
98.3 | 999.99 | 2167 | 0.0 | ggdbv1_35272 |