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ACD2_40_6 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
DNA-directed RNA polymerase subunit beta' n=5 Tax=Dehalococcoides RepID=RPOC_DEHSC (db=UNIREF evalue=0.0 bit_score=1026.0 identity=42.5 coverage=94.0119760479042) similarity UNIREF
DB: UNIREF
42.5 94.01 1026 0.0 det:DET0604
rpoC; DNA-directed RNA polymerase, beta' subunit (EC:2.7.7.6) rbh KEGG
DB: KEGG
43.3 999.99 991 2.70e-286 det:DET0604
rpoC; DNA-directed RNA polymerase, beta' subunit (EC:2.7.7.6) rbh KEGG
DB: KEGG
43.3 999.99 991 2.70e-286 det:DET0604
rpoC; DNA-directed RNA polymerase, beta' subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
43.3 999.99 991 2.70e-286 det:DET0604
seg (db=Seg db_id=seg from=727 to=744) iprscan interpro
DB: Seg
null null null null det:DET0604
seg (db=Seg db_id=seg from=1309 to=1319) iprscan interpro
DB: Seg
null null null null det:DET0604
seg (db=Seg db_id=seg from=298 to=317) iprscan interpro
DB: Seg
null null null null det:DET0604
coiled-coil (db=Coil db_id=coil from=202 to=223 evalue=NA) iprscan interpro
DB: Coil
null null null null det:DET0604
beta and beta-prime subunits of DNA dependent RNA-polymerase (db=superfamily db_id=SSF64484 from=36 to=1292 evalue=0.0) iprscan interpro
DB: superfamily
null null null 0.0 det:DET0604
DNA-DIRECTED RNA POLYMERASE (db=HMMPanther db_id=PTHR19376 from=37 to=1291 evalue=0.0) iprscan interpro
DB: HMMPanther
null null null 0.0 det:DET0604
DNA-DIRECTED RNA POLYMERASE BETA CHAIN (db=HMMPanther db_id=PTHR19376:SF4 from=37 to=1291 evalue=0.0) iprscan interpro
DB: HMMPanther
null null null 0.0 det:DET0604
rpoC_TIGR: DNA-directed RNA polymerase, bet (db=HMMTigr db_id=TIGR02386 from=41 to=1298 evalue=0.0 interpro_id=IPR012754 interpro_description=DNA-directed RNA polymerase, subunit beta-prime GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMTigr
null null null 0.0 det:DET0604
no description (db=HMMSmart db_id=SM00663 from=327 to=608 evalue=5.5e-146 interpro_id=IPR006592 interpro_description=RNA polymerase, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMSmart
null null null 5.50e-146 det:DET0604
no description (db=Gene3D db_id=G3DSA:3.90.1120.10 from=35 to=439 evalue=2.2e-98 interpro_id=IPR007080 interpro_description=RNA polymerase Rpb1, domain 1 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: Gene3D
null null null 2.20e-98 det:DET0604
RNA_pol_Rpb1_1 (db=HMMPfam db_id=PF04997 from=42 to=436 evalue=2.9e-76 interpro_id=IPR007080 interpro_description=RNA polymerase Rpb1, domain 1 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMPfam
null null null 2.90e-76 det:DET0604
RNA_pol_Rpb1_2 (db=HMMPfam db_id=PF00623 from=438 to=579 evalue=2.5e-46 interpro_id=IPR000722 interpro_description=RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMPfam
null null null 2.50e-46 det:DET0604
RNA_pol_Rpb1_5 (db=HMMPfam db_id=PF04998 from=829 to=1253 evalue=5.0e-46 interpro_id=IPR007081 interpro_description=RNA polymerase Rpb1, domain 5 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMPfam
null null null 5.00e-46 det:DET0604
no description (db=Gene3D db_id=G3DSA:2.40.40.30 from=440 to=582 evalue=5.2e-27 interpro_id=IPR000722 interpro_description=RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: Gene3D
null null null 5.20e-27 det:DET0604
RNA_pol_Rpb1_3 (db=HMMPfam db_id=PF04983 from=583 to=721 evalue=3.3e-20 interpro_id=IPR007066 interpro_description=RNA polymerase Rpb1, domain 3 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMPfam
null null null 3.30e-20 det:DET0604
dev:DhcVS_544 rpoC; DNA-directed RNA polymerase beta subunit; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] alias=ACD2_C00040G00006,ACD2_1456.17442.57G0006,ACD2_1456.17442.57_6 id=35273 tax=ACD2 species=unknown genus=Dehalococcoides taxon_order=unknown taxon_class=Dehalococcoidetes phylum=Chloroflexi organism_group=BD1-5 organism_desc=BD1-5 similarity UNIREF
DB: UNIREF90
100.0 null 2696 0.0 det:DET0604
dev:DhcVS_544 rpoC; DNA-directed RNA polymerase beta subunit; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=ACD2 UNIPROT
DB: UniProtKB
98.4 999.99 2442 0.0 ggdbv1_35273