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SCNpilot_expt_300_bf_scaffold_2114_5

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 4258..4986

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide heptosyltransferase I {ECO:0000313|EMBL:EGP06622.1}; EC=2.4.1.- {ECO:0000313|EMBL:EGP06622.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bra similarity UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 220.0
  • Bit_score: 347
  • Evalue 1.10e-92
rfaC; lipopolysaccharide heptosyltransferase 1 (EC:2.-.-.-) similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 220.0
  • Bit_score: 333
  • Evalue 5.70e-89
glycosyl transferase family 1 n=1 Tax=Afipia birgiae RepID=UPI000315424E similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 218.0
  • Bit_score: 355
  • Evalue 4.90e-95

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Taxonomy

Bradyrhizobiaceae bacterium SG-6C → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
ATGGTTTCCAAAACCTCACTCGATTTGCGGGATTCCATGGCGAATACGCCCGGCCTCATTTTCATCAAGACATCCTCGCTCGGCGACGTGGTGCATCAGATGCCGGCAATGACCGACGCGCGGCGGCGCCATCCCGATGTGAGATTCACCTGGGTGGTGGAGGAGGCGTTCGCGCCGCTGGCGCGATTGCATCCGGCGATCGACGAGGTGGTGCCGGTGGCGACGCGGCGCTGGCGCTCGCAATTGCTGTCGCCCGCGACATGGCGCGAGGTGTCGGCATTCAAGGCAAGGTTGCACGCCATCGATGCAGCGAAGACCATCGACACGCAGGGACTGCTGCGCTCCGCGCTGATCGCGCATTACGCGCCGGGCGAGCGGCATGGCTACGATGCCGCCAGCATCCGCGAGCCGCTGGCATCGCGTTTCTATGACGTCACCCACAGCGTCTCGCGCACTCTGCATGCGGTGACGCGCAATCGCACGCTGACCGGTCTCAGTCTCGGCTATCAGCCCGACGCGGCGATCGACTACGGTCTGGTCAAGCCGCCGGTGGCGGCGGGCGCGCCTTACGCGGTGTTGTTGCACGGCACTTCGAAGGCGACCAAGGAGTGGCGCGAGTCCGAATGGATCGGCCTCGGCAAATGGTTGCGGCGGCAGGGTCTCGACGTGGTGCTGCCATGGGGCACCGAGCGCGAGCGCCTGCGCTGCTCGACGCCACCGCCGGTGTGA
PROTEIN sequence
Length: 243
MVSKTSLDLRDSMANTPGLIFIKTSSLGDVVHQMPAMTDARRRHPDVRFTWVVEEAFAPLARLHPAIDEVVPVATRRWRSQLLSPATWREVSAFKARLHAIDAAKTIDTQGLLRSALIAHYAPGERHGYDAASIREPLASRFYDVTHSVSRTLHAVTRNRTLTGLSLGYQPDAAIDYGLVKPPVAAGAPYAVLLHGTSKATKEWRESEWIGLGKWLRRQGLDVVLPWGTERERLRCSTPPPV*