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SCNpilot_expt_300_bf_scaffold_2114_6

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 4935..5207

Top 3 Functional Annotations

Value Algorithm Source
rfaC; lipopolysaccharide heptosyltransferase I (EC:2.4.-.-) similarity KEGG
DB: KEGG
  • Identity: 68.1
  • Coverage: 91.0
  • Bit_score: 120
  • Evalue 2.80e-25
Lipopolysaccharide heptosyltransferase 1 {ECO:0000313|EMBL:AEI07341.1}; EC=2.-.-.- {ECO:0000313|EMBL:AEI07341.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bra similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 91.0
  • Bit_score: 120
  • Evalue 1.40e-24
Lipopolysaccharide heptosyltransferase 1 n=2 Tax=Oligotropha carboxidovorans RepID=B6JBC1_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 91.0
  • Bit_score: 120
  • Evalue 1.00e-24

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Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 273
ATGGGGCACCGAGCGCGAGCGCCTGCGCTGCTCGACGCCACCGCCGGTGTGATCGCCAACGCGGCGCTGGTGGCCGGCGTCGATACCGGGCTGCTGCATCTGGCGGCGGCGTATTCCGTGCCGCTGATCGCGGTGTTCATCGCCACCGATCCGGGCCTCACCGGGCCGGTCGGCGGCGGCCCCATCGTGGTGCTGGGCGGCAAGGGCGAAGCCCCGGCCTTCGCCCAGGCGATCGCGGAGGCGGAGAAACTCGGTTTCGGCCAGGCTCGATAG
PROTEIN sequence
Length: 91
MGHRARAPALLDATAGVIANAALVAGVDTGLLHLAAAYSVPLIAVFIATDPGLTGPVGGGPIVVLGGKGEAPAFAQAIAEAEKLGFGQAR*