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SCNpilot_expt_300_bf_scaffold_2125_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 3..1391

Top 3 Functional Annotations

Value Algorithm Source
rhlE; ATP-dependent RNA helicase RhlE (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 493.0
  • Bit_score: 687
  • Evalue 2.90e-195
RNA helicase n=1 Tax=Afipia birgiae RepID=UPI0002E1B646 similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 464.0
  • Bit_score: 733
  • Evalue 1.30e-208
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34118.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717 similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 470.0
  • Bit_score: 721
  • Evalue 9.20e-205

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1389
CCCACCCCGATCCAGGCCCAGGCGATTCCGATCGCCATCACCGGCCGTGACCTCGTCGGCATCGCCCAGACCGGAACCGGCAAGACCGCCTCCTTCGCGCTTCCCATTCTCCATCGTCTGCTCGAGAACCGCACCCGTCCGCAGCCCAAGAGCTGCCGTGTGCTGGTGCTGAGCCCGACCCGCGAATTGTCGGGCCAGATCCTCGACAGCTTCAGCGCCTATGGCCGCCACATCCGCCTCACCTCCACCCTCGCCATCGGCGGCGTGCCGATGGGCCGTCAGGTCCGTGCGATGATGCCGGGCGTGGAAGTGCTGGTCGCCACTCCGGGCCGCCTGCTCGACCTCGTGCAGGGCAACGCGCTGAAACTCAACCAGGTCGAGTTCCTGGTGCTCGACGAAGCCGACCGCATGCTCGACATGGGCTTCATCAACGACATCCGCAAAATCGTCGCCAAGCTGCCCGCGAAGCGCCAGACCCTGTTTTTCTCGGCCACCATGCCGAAGGACATCGCCGATCTCGCCGAGCATATGCTGCGCGATCCGGCGCGGGTCGCGGTGACGCCGGTGTCCTCGACGGTGGAGCGCATCACCCAGCGCGTGATCCAGGTCGATCACACCGCCAAGCCCGCAGTGCTCGCCGAACTGCTCGCCAACGAGCCGGTCAACCGCGCGCTGGTGTTCACCCGCACCAAGCACGGCGCCGACAAGGTTGTGAAGGGCCTCGCCAAGGCCGGCATCGCCGCCGAGGCGATCCACGGCAACAAGTCGCAGAACCATCGCGAGCGCGTGCTCGCCGCGTTCCGCAACGGCGACATCCGCACCCTGATCGCGACCGACATCGCCGCGCGCGGCATCGACGTCGACGGCATCACCCATGTGATCAATTTCGATCTCACCAACGTGCCCGAGACCTACGTGCACCGCATCGGCCGCACCGCGCGCGCCGGCGCCGACGGCACCGCGATCTCGCTGGTGGCCGGCGAGGAAAACACCTACCTGCGCGATATCGAGAAGCTGATCCGCATCTCGCTGCCGCGTGAGGATCGCCGCACGCCGGGCCATGCCCGCGCCGCGGCGCCCGCACCGGCGCAGCAGCCTCGCAGCGCGCGCGGCCCGCACGGCCATCCGGCGCGCGGACAGGATGGCGCTCCGTCCGCCAAGGGACCGCGCCGCCGGCGCCGGCCCGGAGGCGGCGCGCCGAATGCGCACCGGCACGAGACCGCCAGCCACGGCGCCGGTCAGAAAACCGGCCACGGCCGGCACGATCAGGCCCGGACTTCGCAGGGCGGCAAGGCCGACGGCATTTCCGGCGTCGCCTTCCTCCATCGCGAAAGCCGCCCTTCCCGCCCCGTATCGCAACCCAAGCGCAATCAGCGTCCGCAACGCTAA
PROTEIN sequence
Length: 463
PTPIQAQAIPIAITGRDLVGIAQTGTGKTASFALPILHRLLENRTRPQPKSCRVLVLSPTRELSGQILDSFSAYGRHIRLTSTLAIGGVPMGRQVRAMMPGVEVLVATPGRLLDLVQGNALKLNQVEFLVLDEADRMLDMGFINDIRKIVAKLPAKRQTLFFSATMPKDIADLAEHMLRDPARVAVTPVSSTVERITQRVIQVDHTAKPAVLAELLANEPVNRALVFTRTKHGADKVVKGLAKAGIAAEAIHGNKSQNHRERVLAAFRNGDIRTLIATDIAARGIDVDGITHVINFDLTNVPETYVHRIGRTARAGADGTAISLVAGEENTYLRDIEKLIRISLPREDRRTPGHARAAAPAPAQQPRSARGPHGHPARGQDGAPSAKGPRRRRRPGGGAPNAHRHETASHGAGQKTGHGRHDQARTSQGGKADGISGVAFLHRESRPSRPVSQPKRNQRPQR*