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SCNpilot_expt_300_bf_scaffold_2125_3

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 1977..2183

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein CspA n=10 Tax=Bradyrhizobiaceae RepID=B6JJC2_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 68.0
  • Bit_score: 140
  • Evalue 5.40e-31
cold-shock DNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 68.0
  • Bit_score: 140
  • Evalue 1.50e-31
Cold shock protein CspA {ECO:0000313|EMBL:EKS34120.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 68.0
  • Bit_score: 140
  • Evalue 7.50e-31

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 207
ATGGGAACAGTGAAGTGGTTCAACGCGACCAAGGGTTACGGGTTTATTCAGCCGGATGACGGCGGCAATGACGTGTTCGTGCACATCAGCGCCGTCGAGCGCGCCGGTCTCGGAACGCTGCGTGAAGGCCAGAAGATCAGCTACGAGATCGTCGCCGATCGCCGCTCCGGCAAGTCGTCGGCCGACAATCTCCGCGCCGCGGGCTGA
PROTEIN sequence
Length: 69
MGTVKWFNATKGYGFIQPDDGGNDVFVHISAVERAGLGTLREGQKISYEIVADRRSGKSSADNLRAAG*