ggKbase home page

SCNpilot_expt_300_bf_scaffold_2610_2

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(1530..2426)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Afipia felis ATCC 53690 RepID=K8NS80_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 299.0
  • Bit_score: 432
  • Evalue 3.00e-118
  • rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EKS30325.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia similarity UNIPROT
DB: UniProtKB
  • Identity: 73.6
  • Coverage: 299.0
  • Bit_score: 432
  • Evalue 4.20e-118
HlyD family protein similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 299.0
  • Bit_score: 426
  • Evalue 7.90e-117

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGCCAAGCAAAATGTCGATCCTTCGCGTTCTCGTCACCGTCACCGCGGTGCTCATCGCCAGCATCGCCGGCTGGTACCTGTGGCGGGTCTACGAGGAAAGCCCATGGACCCGCGACGGCCGGGTGCGCGCCAATGTGGTGATGGTGGCGCCGGACGTCGCGGGCGCGGTGATCGACATCCGCGTCAAGGACAATCAGGAGGTGAAGCTCGGCGACGTGCTGTTCACGATCGATCCGGCGCGCTACCGGCTTGCGCTGGCGGCGGCCGAGGCCGCGCTCGCCGGCGCGAAAAGCGTGCTCGACCAGCGCAAGGAAGAGCAGGACCGGCGCGAGCATCTGAGTTCGGCCTCGATCTCGGCGGAGGCGCTCAATCAGGCCCGCAGCGCGGCGCTGGCGGCGCAGGCGAATTACGATCAGGCAGTCGCGGCCCTCGGCGTCGCCAAGCTCAACCTCGTCCGCACCGAAGTGCGCGCGCCGGTCAACGGCCACGTCACCAATCTTCTGGTGGATCGCGGCGACTACGCCACCGCCGGCCATGCCATGGTCGCGGTGGTCGACAGCGATTCCTATTACGTCGCCGGCTATTTCGAGGAAACCAAGCTGCGCAGCATCAAGATCGGCGATCCGGCATCGATCCGGCTGCTCGGCTTCAGCGCGCCGCTGCAGGGCCATGTCCAGAGCGTCGCCCGCGCCATCACCGATCGCGACAACGCCATCGGCAACGACCTGATCGCCAACGTCAACCCGACCTTCAGCTGGGTCCGCCTCGCCCAGCGCATTCCGGTGCGCATCGCCATCGACCGGATTCCGGACGGGATCACCCTCAGCGCCGGCATGACCGCGACCGTGGTGGTGACCGCGCCCGGCAACGACCGCTCGGTCAAGCCGCCGCGGTGA
PROTEIN sequence
Length: 299
MPSKMSILRVLVTVTAVLIASIAGWYLWRVYEESPWTRDGRVRANVVMVAPDVAGAVIDIRVKDNQEVKLGDVLFTIDPARYRLALAAAEAALAGAKSVLDQRKEEQDRREHLSSASISAEALNQARSAALAAQANYDQAVAALGVAKLNLVRTEVRAPVNGHVTNLLVDRGDYATAGHAMVAVVDSDSYYVAGYFEETKLRSIKIGDPASIRLLGFSAPLQGHVQSVARAITDRDNAIGNDLIANVNPTFSWVRLAQRIPVRIAIDRIPDGITLSAGMTATVVVTAPGNDRSVKPPR*