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SCNpilot_expt_300_bf_scaffold_2610_4

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(2635..4386)

Top 3 Functional Annotations

Value Algorithm Source
Fusaric acid resistance protein conserved region n=1 Tax=Afipia sp. 1NLS2 RepID=D6V199_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 57.5
  • Coverage: 574.0
  • Bit_score: 636
  • Evalue 2.70e-179
  • rbh
p-hydroxybenzoic acid efflux pump subunit AaeB {ECO:0000313|EMBL:CEG10134.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipi similarity UNIPROT
DB: UniProtKB
  • Identity: 57.5
  • Coverage: 574.0
  • Bit_score: 636
  • Evalue 3.70e-179
fusaric acid resistance protein similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 582.0
  • Bit_score: 602
  • Evalue 9.20e-170

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1752
ATGCTGTCGGGTTATTCGGCGGCGATCATCGGCCTGCCCGCCGTGCTGGCGCCGGACACCGCGTTCGATTTCGCGGTGGCGCGCTGCCTCGAGATCATGCTCGGCATCGGTTGCGGCACGCTGATCCATCACGTCGTGTTCCCGCAGCGCGCCGGCGATACGCTCCGCAAGGCGCTCGACGCCACGCTGCCGACCATGGCGCGCTGGGTCGGCGACGCGCTGCGCGGTCAGGAGGGCGAAGCCAAGGGCCTCGTCGACCGCCGTCAGGTGATCTCCTCGGTGGTCGCGCTGGATTCGCTGCGCACCTTCGCCATTCTCGACACGCCCGAAATCCGGGCGATCGACCGTCCGATTCGGCAATATCAGGGCAAGCTGCTCTCGCTGCTGGCACTGCTGGTGTCGATCTACGACCGCTTCGCCCTGCTCACCCGCACGCAGCCGGCCACCGCGTCGCGGCTGCGCCCGCTGCTGGAGCGGGCCGCGACCCATATCGCCGCCTCCGCCGCCGATGCGCAATTCGGCCTCACATCCGACTCGGCTGCGGAACGCGAGCGCCTCGCGGCCGACATCGCCCGCCATCTGCCCTCGCAACACGATCTTCGCGCCGATCCGCGCGCGTTCCTGGCGCGCTCGATCCTGCTGCGGCTGCGCGACACCATCGTGCTATGGCACGAGACCGTGCTGTTGCGCATGCATATGACCAGCGGCTTTCATCCGCTGCAATCGACCCCGGCACCGGCGCAGCTTCCCTATCGCGACATCCAGTTCGCCCTGATCGCCGGCGGCATCGCAGCCGCGACGGTGCTGATCGCCAGCGTGTTCTGGATCGCGACCGCCTGGCCGAACGGCCCGACCGCGGTGACCTTCGCCGGCATCGTCTGCGCCATCATGGGCGCGCGCGACGACCCCACCGCCGCCACCATGATCTTCCTGAAGATGAGCGTGGTCGGCGGCGCGATCGCGGCGGTCTATCTGTTCGGCGTGCTGCCGACCCTCAACACCTTTCCGGCGCTGGTCGTCGCGCTCGCGCCGTTCTATCTGGTCAGCGGCCTGTTCCTGGCCGTGCCCTCCGCCATCGGCTATGCGCTGCCGCTGATTCTCAACGGCGGTGCGCTGATCGGCGTCTCCAACGAGATGAACTACGACTTCGCCACCTTCATCAACAGCTTCATCGGCTATCTGGTCGGCATCGGCATCGGCGCGGTGGCGCTGCGGCTGCTGCGTCCGCTCAGCGCCGAATGGGCGGTGCAGCGCCTGACGCGCGGCATGATGCGCGATCTGGCGCAGATCGCGGCGGGCAACGCCACCTTCGACCAGCGCACCACCTTCGAGAGCCGAATGTTCGACCGCATCAACGCGCTGTTCGTGCGGCTCGATCCGATGATCGGCGAACAGCGCGCCGCCATGCAGGGCGGCCTCGGCGCCCTGCGCATCGGCCTCAACATCCTTGCGCTCAAGAGCTTCCGCGCCAGCCTGCCCGCCATCCCCGATGCCGCCGTCGCCAGCGCGCTGGAAGCTCTGGCGGATCACTTCGAGCGCCTGGCACGGCATAATGCGGGCGGCATGCCGCTGCCGGTTTTGCGCGCGGCGCGCGAGCGCATCCTTACGCTCGACGAGGACACTTTGCTGACCCAGAGCGCCGAAGCGCTCTATAGTATCGAGATGACCCTCGCGCAGCATGCCGCGTTCTTCGGCCTCGTCCCGGCGGATGATCCCGTCGCCGCGACCGAATCCGATCCGGTGCCGACATGA
PROTEIN sequence
Length: 584
MLSGYSAAIIGLPAVLAPDTAFDFAVARCLEIMLGIGCGTLIHHVVFPQRAGDTLRKALDATLPTMARWVGDALRGQEGEAKGLVDRRQVISSVVALDSLRTFAILDTPEIRAIDRPIRQYQGKLLSLLALLVSIYDRFALLTRTQPATASRLRPLLERAATHIAASAADAQFGLTSDSAAERERLAADIARHLPSQHDLRADPRAFLARSILLRLRDTIVLWHETVLLRMHMTSGFHPLQSTPAPAQLPYRDIQFALIAGGIAAATVLIASVFWIATAWPNGPTAVTFAGIVCAIMGARDDPTAATMIFLKMSVVGGAIAAVYLFGVLPTLNTFPALVVALAPFYLVSGLFLAVPSAIGYALPLILNGGALIGVSNEMNYDFATFINSFIGYLVGIGIGAVALRLLRPLSAEWAVQRLTRGMMRDLAQIAAGNATFDQRTTFESRMFDRINALFVRLDPMIGEQRAAMQGGLGALRIGLNILALKSFRASLPAIPDAAVASALEALADHFERLARHNAGGMPLPVLRAARERILTLDEDTLLTQSAEALYSIEMTLAQHAAFFGLVPADDPVAATESDPVPT*