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SCNpilot_expt_300_bf_scaffold_8104_2

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(897..2354)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane efflux protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JJY7_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 94.9
  • Coverage: 486.0
  • Bit_score: 872
  • Evalue 1.80e-250
  • rbh
Copper resistance protein {ECO:0000313|EMBL:KIZ44779.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 485.0
  • Bit_score: 915
  • Evalue 2.70e-263
outer membrane efflux protein similarity KEGG
DB: KEGG
  • Identity: 94.9
  • Coverage: 486.0
  • Bit_score: 872
  • Evalue 5.20e-251

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1458
ATGAAAATCATCAATGGCGTGCCGTTCCATCAGAGCCTCCGCCGCCATCGGTCGGCGTTGGCGCTAACCGTGTCCCTTCTTCTTTCCGGTTGTGCGACGTTCTCGCCGGATCGTGGAATGGGCGTCGTGTCCGATATCGCTGGCCAGACGATCAAGAAGGACGTGGTCGCGATCCGCTCCGTGGACGAAGCCCAGCAGGCCGACGATGCTGTCAAGCGGCTGCTGCGCCGAGCGCTCAATGTCGATACCGCCGTCCAGGTCGCGTTGCTCAACAATCGCGGCTTGCAGGCCGCGTACAACGAATTGGCGTTGGCGGAAACCGACCTCGTCCAGGAAAGCCTTCCGCCCAATCCGACATTCTCGATTTCGCGAATATCGGGCGGCGGCGCCGTCGAAATCGAACGTCAGGTGGTCGGGGACATTCTTGCGTTGGCGACGCTGCCGTTCCGTTCCGAGATCGCCAAGAGGCGATTCCACCAGGCGCAATTGCGGGCAGCATTGGAGACCTTGAGGCTCGCGTCCGATGTGCGGCGATCCTACTACCGCGCCGTCGGCGCTAACGAGATGGTCGGCCTTCTCACAGATGCCAAGTCCACGGCGGAGGCGACCGCCAAGCTGGCCTCAAAACTGGGTGAAACCGGTTCGCTCAACAAGCTCGATCAGGCCCGCGAGCAGGTCTTCTACGCGGAGACGACAGCCGATCTCGCTTCGGCACGTCAGGAGGCGACCAGTTCGCGTGAACGTCTCGCACGACTGATGGGGCTTTGGGACGGCGAACTTACGTTCCGCCTGCCCAAGACGCTTCCGCCATTGCCACGACGTCCTTCCGCTCTGCCGTCGATCGAAGTGGATGCAGTGACGCACCGGATCGACCTGCAGATCGCACGCATCGAACTGGATGCGCTGGCGAAATCGCTCAATCTCACGGAAGCGAGTCGTTTCGTCACGCTGCTCGATGTTGCAGGAATCGCGAAGACCACCAGGGATCCCGATGGCTCCCGGTTCCGTGAACGCGGCTTCGACATCCAGTTCCAGATCCCCATCTTCGATGGCGGCGAAGTCCGGGTGCGACAAGCGAGCGAGACCTACAATCAGGCCTTCAATCGCCTGACCGAGAAGGCGATCAACGTGCGCTCGGAAGCACGAGACGCGTACCGGACGTATCGATCGAGCTACGAGATCGCCCGGCAGTATGAGCGCGAGGTGCTGCCGCTCCGGAAGATCATCACCGAAGAAATGCAGCTGCGCTTCTCGAGCATGCAGGTCGATGTGTTCGCGCTGCTGACGGAAGCGCGCCAGCGCATCGCGTCGCTGCGGGCCGGAATCGATGCCAAGCGCAGCTTCTGGCTCGCCCAATCTGATCTGCAGACCGCCGTCAACGGCGGCGGCTCGGGAGAAACACAAATAGAGTCCCGTCCGACGACCACCGCCCAGGCTGGCGGCGGCGGCGGTCATTGA
PROTEIN sequence
Length: 486
MKIINGVPFHQSLRRHRSALALTVSLLLSGCATFSPDRGMGVVSDIAGQTIKKDVVAIRSVDEAQQADDAVKRLLRRALNVDTAVQVALLNNRGLQAAYNELALAETDLVQESLPPNPTFSISRISGGGAVEIERQVVGDILALATLPFRSEIAKRRFHQAQLRAALETLRLASDVRRSYYRAVGANEMVGLLTDAKSTAEATAKLASKLGETGSLNKLDQAREQVFYAETTADLASARQEATSSRERLARLMGLWDGELTFRLPKTLPPLPRRPSALPSIEVDAVTHRIDLQIARIELDALAKSLNLTEASRFVTLLDVAGIAKTTRDPDGSRFRERGFDIQFQIPIFDGGEVRVRQASETYNQAFNRLTEKAINVRSEARDAYRTYRSSYEIARQYEREVLPLRKIITEEMQLRFSSMQVDVFALLTEARQRIASLRAGIDAKRSFWLAQSDLQTAVNGGGSGETQIESRPTTTAQAGGGGGH*