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SCNpilot_expt_300_bf_scaffold_3758_6

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(2619..2798)

Top 3 Functional Annotations

Value Algorithm Source
Excinuclease ABC, C subunit domain protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07QY7_RHOP5 similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 59.0
  • Bit_score: 100
  • Evalue 7.10e-19
excinuclease ABC subunit C similarity KEGG
DB: KEGG
  • Identity: 74.6
  • Coverage: 59.0
  • Bit_score: 101
  • Evalue 8.80e-20
Excinuclease ABC, C subunit domain protein {ECO:0000313|EMBL:ABJ05647.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 74.6
  • Coverage: 59.0
  • Bit_score: 101
  • Evalue 4.40e-19

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 180
GTGCCGGGATTTTCAGCCCGCTATGGCTGCAAGATGCTGGTGTGGTACGAAGTGCACGAGCGCATGGCGGAAGCCATCTCGCGGGAGAAGCAGATCAAAAGCGGTAGCCGTAGAAGCAAGTTGACCCTGATCGAGAGTCTCAATCCCGATTGGACGGATCTCTATGACACTCTGGTGTGA
PROTEIN sequence
Length: 60
VPGFSARYGCKMLVWYEVHERMAEAISREKQIKSGSRRSKLTLIESLNPDWTDLYDTLV*