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SCNpilot_expt_300_bf_scaffold_3784_8

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(8689..9003)

Top 3 Functional Annotations

Value Algorithm Source
Tyrosine recombinase XerD n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WR23_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 103.0
  • Bit_score: 190
  • Evalue 7.00e-46
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 103.0
  • Bit_score: 190
  • Evalue 9.70e-46
xerD; tyrosine recombinase XerD similarity KEGG
DB: KEGG
  • Identity: 88.3
  • Coverage: 103.0
  • Bit_score: 188
  • Evalue 7.40e-46

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Taxonomy

Nitrobacter sp. Nb-311A → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
GGCAAGACATCCGCGCTCGCGCGCGGCAAATGGCTGTTTCCCTCATCCGGCGACAGCGGGCACCTGACGCGGCAGCATTTCGCGCGCGACCTCAAGGAGCTTGCCGCCGCCGCCGGCCTGCCGCCGCGCATCGTCAGCCCGCATGTGCTGCGCCATGCCTTCGCCAGCCATCTGCTGCACAATGGCGCGGATCTGCGCATCGTGCAGACCCTGCTCGGCCATACCGACATTTCCACCACGCAAATCTACACCCACGTCGTCGAAGAGAGGCTGAAGAGCCTGGTGCGGGACCTGCATCCGCTTGCGGAAAAATAA
PROTEIN sequence
Length: 105
GKTSALARGKWLFPSSGDSGHLTRQHFARDLKELAAAAGLPPRIVSPHVLRHAFASHLLHNGADLRIVQTLLGHTDISTTQIYTHVVEERLKSLVRDLHPLAEK*