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SCNpilot_expt_300_bf_scaffold_6109_3

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 1650..1988

Top 3 Functional Annotations

Value Algorithm Source
polyphenol oxidase n=1 Tax=Afipia birgiae RepID=UPI0003150282 similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 111.0
  • Bit_score: 192
  • Evalue 2.60e-46
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATC similarity UNIPROT
DB: UniProtKB
  • Identity: 79.3
  • Coverage: 111.0
  • Bit_score: 181
  • Evalue 8.30e-43
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 76.6
  • Coverage: 111.0
  • Bit_score: 177
  • Evalue 1.80e-42

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 339
ATGGAAAGCCTCGGCGCGGCGCGCGCGTCCATCGTCGCCGCGATCGGACCCCTGATCCGCCAGCCGAGCTACGAGGTCGGCGCGGAATTCGTCGCACGCTTCACCGAGGCGGATGCCGCCAACGCGCGATTCTTCGTGCCGTCAGCGCGCGCGGACCATTCGATGTTCGATCTTGCGGGCTATATCCGTCTGCGGCTGGAGCGAGCCGGACTGCAGGCGATCGACGACACCGGCATCGATACCTATCCGGACGAGCGCCTGTTCAGCTATCGCCGCTCGGTTCATCGCAAGGAGCCGGATTACGGCCGCAACATCCACGCCATCGTGCTGGAAGACTGA
PROTEIN sequence
Length: 113
MESLGAARASIVAAIGPLIRQPSYEVGAEFVARFTEADAANARFFVPSARADHSMFDLAGYIRLRLERAGLQAIDDTGIDTYPDERLFSYRRSVHRKEPDYGRNIHAIVLED*