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SCNpilot_expt_300_bf_scaffold_6992_9

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 7596..8237

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxI similarity UNIPROT
DB: UniProtKB
  • Identity: 91.7
  • Coverage: 206.0
  • Bit_score: 378
  • Evalue 8.80e-102
ispH2; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2) similarity KEGG
DB: KEGG
  • Identity: 85.3
  • Coverage: 211.0
  • Bit_score: 356
  • Evalue 5.50e-96
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PH24_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 206.0
  • Bit_score: 376
  • Evalue 1.40e-101

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 642
GTGCACAATCAGGGCAAGCGCTACGTCGCCAAGGGCCGGCGGCTGATCCTGATCGGCCATCAGGGGCATCCCGAAGTGGTCGGCACCATGGGCCAGGTACCGGGTCCGGTCCATCTGGTGCAAAGCGTCGCGGACGTGGCTGCGCTGGACCTGCCAAGTGACGAGCCCGTCGCCTACATCACCCAGACGACGCTAAGTGTCGACGATACAAAGGATATTATCGCCGCACTGGAAGACCGTTTCGCCGATCTCGAGGGTCCGGACACCCGCGACATCTGCTATGCGACACAAAATCGCCAGTCTTCGGTACGAGACCTCAGCAAGCTTGTTGACGTCATTTTGGTCGTCGGCGCCACCAACAGCTCCAATTCCAACCGCCTGCGGGAAATCGGCACCGAAGTCGGCGTGCCGAGCTACCTGATCGCGGACGGAAGCGAGCTCAACCCGCTTTGGCTGAAGGGCGCCCGGACCGTCGGCATCACCGCCGGCGCATCGGCGCCCGAAATCCTCGTCGACGACGTGATTGACGCCTTGCGGCGAATCGGGCCGGTCACCGTATCGGTGGTGCCGGGTCGCGAAGAAAACATCGAATTCAGGCTGCCTGCGGAATTGGCTTCGGTCAGGACCGCATCTCACCTTTAA
PROTEIN sequence
Length: 214
VHNQGKRYVAKGRRLILIGHQGHPEVVGTMGQVPGPVHLVQSVADVAALDLPSDEPVAYITQTTLSVDDTKDIIAALEDRFADLEGPDTRDICYATQNRQSSVRDLSKLVDVILVVGATNSSNSNRLREIGTEVGVPSYLIADGSELNPLWLKGARTVGITAGASAPEILVDDVIDALRRIGPVTVSVVPGREENIEFRLPAELASVRTASHL*