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SCNpilot_expt_300_bf_scaffold_12773_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 1..432

Top 3 Functional Annotations

Value Algorithm Source
Secretion protein HlyD family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3X4_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 83.2
  • Coverage: 143.0
  • Bit_score: 247
  • Evalue 6.60e-63
Secretion protein HlyD family protein {ECO:0000313|EMBL:EFI52654.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1 similarity UNIPROT
DB: UniProtKB
  • Identity: 83.2
  • Coverage: 143.0
  • Bit_score: 247
  • Evalue 9.20e-63
putative HlyD-family secretion protein similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 143.0
  • Bit_score: 229
  • Evalue 6.80e-58

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 432
GACAACACTCTGGTCGCCCCGAAGCGGGGACGCATTCAATATCGGCTGGCGAATATCGGCGAGGTTCTGCCCGCCGGCGGCAAGGTGTTCACCTTGCTGGACTTCTCTTACGTCTATATGGACATCTATCTTCCCACGGAGATCGCCGGAAAAGTCAAAGTGGGACACGAGGCCCGCATCGTGCTCGATGCCTACCCCACTCATCCGATCCCGGCCAACGTCTCCTTTGTCGCCAGCAAATCGCAATTCACCCCGAAGACCGTCGAGACCAAGAGCGAGCGTGACAAGCTGATGTTTCGCGTCCGCGTGCGGATCGATCAGCAGCGGCTGCTGACTCACAGCGATTCGATCAGAAGCGGCTTGCCCGGCGTGACGTTCATCCGCTGGGATCCCTCCATCGCATGGCCGAAGAATCTGGAAGCGGCGCCGTGA
PROTEIN sequence
Length: 144
DNTLVAPKRGRIQYRLANIGEVLPAGGKVFTLLDFSYVYMDIYLPTEIAGKVKVGHEARIVLDAYPTHPIPANVSFVASKSQFTPKTVETKSERDKLMFRVRVRIDQQRLLTHSDSIRSGLPGVTFIRWDPSIAWPKNLEAAP*