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SCNpilot_expt_300_bf_scaffold_12773_4

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 3631..4212

Top 3 Functional Annotations

Value Algorithm Source
ABC-2 type transporter n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3X6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 194.0
  • Bit_score: 307
  • Evalue 7.20e-81
ABC-2 type transporter {ECO:0000313|EMBL:EFI52656.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 194.0
  • Bit_score: 307
  • Evalue 1.00e-80
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 193.0
  • Bit_score: 297
  • Evalue 2.70e-78

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGAGCATCATCGGCAGCGTGAACATGCTGGCGATCATTCTCGCCGGTGCGGCCCTCGTTAGGGAGCACGAGCACGGCACGATGGATCATCTCATAGTGATGCCGCTCACGCCGTTCGAGATCGCCATGGCGAAGATCTGGGCCAACAGTCTGGTGATCACGGTCGCAGTCGGCATATCGCTTTACGTTGTCGTTCGCATGCTTTTGAAAGTGCCGCTGGCCGGCTCGATCCCGCTCTTCCTGTTTGGCACGCTCATCTATTTGTTCTTCGCGACCGGGCTCGGCCTGTTCCTGGGCACTATCGCGCGAACCATGCCGCAACTGGGTCTGCTCTATGTGCTGGTCGCGACGCCGATGAACATTCTTTCCGGCGCGGCGACGCCGCTGGAGAGCATGCCCCGATGGCTCGCCATCACCATGCAGGCTTCGCCGTCGACCCATTTCGTCTCGTTCGCGCAGGCCATTCTGTTTCGCGGCGCCGGTCTCGACGTGGTCTGGCCGCAATTTCTGGCGGTGACGGGAATCGGCGCGCTGTTTTTGGCGCTCTCGCTGCTGCGATTCCGGGCGACCGCATCCGCTTAG
PROTEIN sequence
Length: 194
MSIIGSVNMLAIILAGAALVREHEHGTMDHLIVMPLTPFEIAMAKIWANSLVITVAVGISLYVVVRMLLKVPLAGSIPLFLFGTLIYLFFATGLGLFLGTIARTMPQLGLLYVLVATPMNILSGAATPLESMPRWLAITMQASPSTHFVSFAQAILFRGAGLDVVWPQFLAVTGIGALFLALSLLRFRATASA*