ggKbase home page

SCNpilot_expt_300_bf_scaffold_9001_3

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(1944..2330)

Top 3 Functional Annotations

Value Algorithm Source
major facilitator transporter n=1 Tax=Afipia birgiae RepID=UPI0002E59756 similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 127.0
  • Bit_score: 189
  • Evalue 1.90e-45
Uncharacterized protein {ECO:0000313|EMBL:EKS38147.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717 similarity UNIPROT
DB: UniProtKB
  • Identity: 67.5
  • Coverage: 126.0
  • Bit_score: 181
  • Evalue 7.20e-43
putative Permease of the major facilitator superfamily similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 126.0
  • Bit_score: 163
  • Evalue 5.40e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 387
ATGAGCGTGTCCCGGTTGCTGCCGCTGATCGGCGTCAAGAAGCTGATGATCGGCGGCGCGGCGGTGATGGCCCTCCAGTTCATCGCCATTTCCTTCGGGCCGTGGTGGGGCGTTCAGGCAGGTTGCTTCGTGCTGATCGGGTGGGGGTTCTATTCGCTGCACGGATCGCTGCAGGTGTTCGCCAGCGAACTGGCCCCCGAGGCGCGGGCCTCGGCGGTATCGCTGCATGCCTTCTTCTTCTTTCTCGGGCAGGCGGCCGGGCCGGTCGTCTACGGTTTCGGGCTGGCGCATTTCGGCACGCAGCCGACGCTGTTCGTCAGCGCGGCCATCATTCTGATACTCGGGATCGTGTCGGCGACACTGCTGAACCGCAAGCCCGCGCTGTAA
PROTEIN sequence
Length: 129
MSVSRLLPLIGVKKLMIGGAAVMALQFIAISFGPWWGVQAGCFVLIGWGFYSLHGSLQVFASELAPEARASAVSLHAFFFFLGQAAGPVVYGFGLAHFGTQPTLFVSAAIILILGIVSATLLNRKPAL*