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SCNpilot_expt_300_bf_scaffold_13537_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 1..567

Top 3 Functional Annotations

Value Algorithm Source
heme lyase subunit CcmF n=1 Tax=Afipia birgiae RepID=UPI0003097108 similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 191.0
  • Bit_score: 298
  • Evalue 5.60e-78
Cytochrome C biogenesis protein CcmF {ECO:0000313|EMBL:KJC56916.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Brad similarity UNIPROT
DB: UniProtKB
  • Identity: 77.0
  • Coverage: 187.0
  • Bit_score: 301
  • Evalue 7.00e-79
cycK; cytochrome c-type biogenesis protein CycK similarity KEGG
DB: KEGG
  • Identity: 75.4
  • Coverage: 187.0
  • Bit_score: 291
  • Evalue 1.90e-76

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Taxonomy

Bradyrhizobium sp. LTSPM299 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
CAGTTGTTCCGTGCGCCGTTGAACATCTCTTGGCACCGCGCGCGCGGTCTGCCGCGCTCGACCTGGGGCACCGCATTCGCCCATGCCGGTCTTGGCATCGCGCTGATCGGCATCATCTGCGAGAGCACCTGGAACAGCGAGCACATCGCCACCATGCGGCTGAACGACACCGCACAGGTCGGCTCCTATGTCGTCAGACTCGACAGCCTGACCCAGCGGCAGGGGCCGAACTTCCGCGAACAGATCGCGCATTTCACGGTGACGAGCGATGGCAAGACCGTCGGTGTGATGACGCCCTCCAAGCGCAGTTTCACCACGCGCCCGGCCTCGACCACCGAGGCCGCGCTGCTGACGCGCGGCGCAAGCCAAGTCTATATCTCGCTCGGCGACGCCCACGCCGACGGTTCGATCGCGGTGCGGATCTATTACAAGCCGCTGGTGCTGCTGATCTGGTTCGGTCCGTTGCTGATGGCGTTCGGCGGCATGCTGTCGCTGTCCGATCGCCGCCTGCGGGTCGGCGCGCCGAAACCGGCCAAGACGCCACGGGCGTTGCAGCCGGCGGAGTAG
PROTEIN sequence
Length: 189
QLFRAPLNISWHRARGLPRSTWGTAFAHAGLGIALIGIICESTWNSEHIATMRLNDTAQVGSYVVRLDSLTQRQGPNFREQIAHFTVTSDGKTVGVMTPSKRSFTTRPASTTEAALLTRGASQVYISLGDAHADGSIAVRIYYKPLVLLIWFGPLLMAFGGMLSLSDRRLRVGAPKPAKTPRALQPAE*