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SCNpilot_expt_300_bf_scaffold_12325_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(133..837)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PG51_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 46.6
  • Coverage: 219.0
  • Bit_score: 212
  • Evalue 3.80e-52
Uncharacterized protein {ECO:0000313|EMBL:EKS41617.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717 similarity UNIPROT
DB: UniProtKB
  • Identity: 46.6
  • Coverage: 219.0
  • Bit_score: 212
  • Evalue 5.40e-52
tetR; transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 224.0
  • Bit_score: 187
  • Evalue 3.70e-45

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGAAACAAGCCGTCCAGCGCGTTGCCAAAAAAGCCGTGACGACCGCCAAGCCAAAGCAGACCCGCGACCCGGTACGCTCCAAGCAGGCCATCCTGGAGGCTGCCAACGAAGAATTTTATCAGCATGGCTTCAGCGGCGGGCGGGTCGAGAGCATCGCCAAGAACAGCAAGTCCAATATGCGGATGATCTATCACTATTTCGGCGACAAGGAGGGGCTCTACCTCGCCGTACTCGAAGCCGCCTATCTGAGACTGCGCAGCCAGGAATCCAAGCTGGACCTGTCCCTGGTGACGCCGCCCGAGGCCATGCGCCAGCTCATCAGATTCACTTATGACTTCTTCTCGTCAAACAAAGACGTTCTCACACTCATCAACAACGAGAACACCATGAAGGGGCGCTTCCTCAAGCAGTTGCCCAACGTGAAGAACATCACCCAGCCGCTGATCAATGCGATCACCAGCATTCTCAAGCGCGGTCATCGCGATGGCAGTTTCCGCAGCGGCGTCGACCCGTTGCAGTTCTATGTCTCGCTGGTGGCGCTGAGCCAGTTGCACATCCTCAATCGTTTCACGCTGTCGATCGTGTTCGACAAGGACCTCACCGATTCCGCCTGGCTCAAGCAACGCCGGATTTGTGTCGAGGATACGCTGATGGCCTATCTGCAGGACCCCGCTCCCTCGTCGGCTACGCCAAAGGCCTCCTGA
PROTEIN sequence
Length: 235
MKQAVQRVAKKAVTTAKPKQTRDPVRSKQAILEAANEEFYQHGFSGGRVESIAKNSKSNMRMIYHYFGDKEGLYLAVLEAAYLRLRSQESKLDLSLVTPPEAMRQLIRFTYDFFSSNKDVLTLINNENTMKGRFLKQLPNVKNITQPLINAITSILKRGHRDGSFRSGVDPLQFYVSLVALSQLHILNRFTLSIVFDKDLTDSAWLKQRRICVEDTLMAYLQDPAPSSATPKAS*