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SCNpilot_expt_300_bf_scaffold_16576_4

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 1888..2190

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3F8_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 91.0
  • Bit_score: 94
  • Evalue 8.50e-17
Diguanylate cyclase {ECO:0000313|EMBL:ETR74731.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.8
  • Coverage: 102.0
  • Bit_score: 127
  • Evalue 9.80e-27
ABC-type dipeptide/oligopeptide/nickel transport system, permease component similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 78.0
  • Bit_score: 92
  • Evalue 7.00e-17

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Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 303
ATGAGCGTCGAGACCGTCAACGTCGCGGCCGCCGCGTCCGAGGAGACGGGCCTGCTCTCGCGTGCCGGCGTGCTGCGCCGCCTGGCACGCGACAAGATCGCGGCGGCGGCCGCTCTCGCCCTCACGCTGATCGTCCTCTCGGCCGTCTTCGCCCCCCTCATCGCCCCCTACGATCCCTATCTCACCGACCTCACCAAGGTGATGCAGCCGCCCAGCGCCGAGCACTGGTTCGGTACCGACAATACCGGCCGCGACATCTTCAGCCGCATCCTCTACGGCACGCGCAACACGCTGATGCTGGGG
PROTEIN sequence
Length: 101
MSVETVNVAAAASEETGLLSRAGVLRRLARDKIAAAAALALTLIVLSAVFAPLIAPYDPYLTDLTKVMQPPSAEHWFGTDNTGRDIFSRILYGTRNTLMLG