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SCNpilot_expt_300_bf_scaffold_13178_2

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(1153..1833)

Top 3 Functional Annotations

Value Algorithm Source
glutamate dehydrogenase (EC:1.4.1.4) similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 226.0
  • Bit_score: 365
  • Evalue 9.60e-99
glutamate dehydrogenase n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037CC43A similarity UNIREF
DB: UNIREF100
  • Identity: 80.5
  • Coverage: 226.0
  • Bit_score: 376
  • Evalue 2.50e-101
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 226.0
  • Bit_score: 368
  • Evalue 5.60e-99

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 681
ATGCTCGGCACGCGCGGCCAGAGCTTCGACGGCAAGAAGGTGATCGTGTCGGGCGCCGGCAACGTCGCGATCTACACGATCGAGAAGGTGGCGGAGCTGGGTGGCAAGGTCATCGCCTGCTCGGACTCCGACGGCTACGTCCTCGACGAGGCCGGGATCGACCTCGACCTCCTGAAGGAGATCAAGGAGAAGCGGCGCGGCCGGGTGCAGGATTACGCCAAGCATCGCGGTGCCAAGGCGACCTACGTTGCCAACGGCTGCATCTGGGACGTGCCCGCGGATATCGCCATGCCGTCGGCGACGCAGAACGAGCTGACCGGGCGCGATGCCCGCACCCTGGTCAAGAACAAGGTCGTGGCGGTCGGCGAGGGCGCCAACATGCCCTGCACGCCGGAAGCCGTGCGCCTGTTCCTCGAGGCCGGCGTGCTGTTCGGACCGGGCAAGGCGACCAACGCCGGCGGCGTGGCCACCAGCGCGCTGGAGATGCAGCAGAATGCGTCACGCGATTCCTGGAGCTTCGAGGCGACGGAGGAGCGACTGGCCGGCATCATGAACGGCATCCACGACCGCTGCGCCGAGGTGGCCGACGAATACGGATCGCCCGGCAACTACGTGCTCGGCGCCAACATCGCGGGCTTCATCCGCGTTGCCGAAGCCATGCGGGCCTTCGGCGTGGTGTGA
PROTEIN sequence
Length: 227
MLGTRGQSFDGKKVIVSGAGNVAIYTIEKVAELGGKVIACSDSDGYVLDEAGIDLDLLKEIKEKRRGRVQDYAKHRGAKATYVANGCIWDVPADIAMPSATQNELTGRDARTLVKNKVVAVGEGANMPCTPEAVRLFLEAGVLFGPGKATNAGGVATSALEMQQNASRDSWSFEATEERLAGIMNGIHDRCAEVADEYGSPGNYVLGANIAGFIRVAEAMRAFGVV*