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SCNpilot_expt_300_bf_scaffold_13178_3

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(1791..2405)

Top 3 Functional Annotations

Value Algorithm Source
gdh; NADP-specific glutamate dehydrogenase Gdh (EC:1.4.1.4) similarity KEGG
DB: KEGG
  • Identity: 87.1
  • Coverage: 186.0
  • Bit_score: 339
  • Evalue 6.70e-91
glutamate dehydrogenase n=1 Tax=Afipia birgiae RepID=UPI0002DE7498 similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 186.0
  • Bit_score: 353
  • Evalue 1.60e-94
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 186.0
  • Bit_score: 343
  • Evalue 2.30e-91

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 615
ATGCTTGATGAAAAGCTGGAGCCGATTTTTGCCGACGTGCTGCGCCGCAATCCGGGAGAAGAAGAATTCCATCAGGCGGTGCGCGAGGTTCTCGACAGTCTCGGCGCCGTGATCGCGAAACATCCGGACTATGCCGAGGATGCGCTGATCGAGCGGATCTGTGAGCCGGAGCGACAGATCATCTTCCGCGTGCCCTGGGTCGACGACCGCGGGCAGGTCCAGATCAATCGCGGCTTCCGCGTCCAGTTCAATTCCGCGCTCGGCCCCTTCAAGGGCGGGCTGCGCTTTCATCCGACCGTCTATCTCGGCACGGTGAAGTTCCTGGGTTTCGAGCAGGTCTTCAAGAATGCACTGACGGGCATGCCGATCGGCGGCGGCAAGGGCGGCTCCGACTTCGCTCCCAAGGGCCGGTCGACCGGCGAGGTCATGCGCTTCTGCCAGTCCTTCATGACCGAGCTGTCGCGCCACCTCGGCGAGTACACCGACGTGCCGGCGGGCGACATCGGCGTCGGCCAGCGCGAGATCGGCTACATGTTCGCACGGGTTACGGCGCCGTCTACTTCGTTGAGCGAATGCTCGGCACGCGCGGCCAGAGCTTCGACGGCAAGAAGGTGA
PROTEIN sequence
Length: 205
MLDEKLEPIFADVLRRNPGEEEFHQAVREVLDSLGAVIAKHPDYAEDALIERICEPERQIIFRVPWVDDRGQVQINRGFRVQFNSALGPFKGGLRFHPTVYLGTVKFLGFEQVFKNALTGMPIGGGKGGSDFAPKGRSTGEVMRFCQSFMTELSRHLGEYTDVPAGDIGVGQREIGYMFARVTAPSTSLSECSARAARASTARR*